Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118939480 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 69428060 ~ 69428841 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| LOC118939480 | True | 624 | mRNA | 0.46 | 3 | 69428060 | 69428841 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492642 | LOC106566441 | coding | upstream | 80505 | 69313323 ~ 69347555 (+) |
| fkbp1ab | LOC100705189 | coding | upstream | 115856 | 69305670 ~ 69312263 (+) |
| LOC110492640 | mfsd2 | coding | upstream | 122668 | 69289013 ~ 69305392 (+) |
| LOC110492639 | LOC106566439 | coding | upstream | 146445 | 69277801 ~ 69281615 (+) |
| LOC110492915 | NA | coding | upstream | 153783 | 69272791 ~ 69274286 (+) |
| LOC110492656 | LOC106566444 | coding | downstream | 264181 | 69693022 ~ 69696403 (+) |
| LOC110492659 | LOC106566420 | coding | downstream | 557336 | 69986177 ~ 69996398 (+) |
| LOC118939577 | LOC106566421 | coding | downstream | 614407 | 70043248 ~ 70069326 (+) |
| LOC110492657 | hck | coding | downstream | 649852 | 70078693 ~ 70095267 (+) |
| LOC110492652 | LOC106566422 | coding | downstream | 667608 | 70096449 ~ 70111837 (+) |
| G1404839 | NA | non-coding | upstream | 15214 | 69391458 ~ 69412846 (+) |
| G1404832 | NA | non-coding | upstream | 49491 | 69378272 ~ 69378569 (+) |
| G1404807 | NA | non-coding | upstream | 74005 | 69351568 ~ 69354055 (+) |
| G1404810 | NA | non-coding | upstream | 114833 | 69313013 ~ 69313227 (+) |
| G1404799 | NA | non-coding | upstream | 142362 | 69285284 ~ 69285698 (+) |
| G1405082 | NA | non-coding | downstream | 1484 | 69430325 ~ 69431433 (+) |
| G1405118 | NA | non-coding | downstream | 40208 | 69469049 ~ 69470157 (+) |
| G1405169 | NA | non-coding | downstream | 87247 | 69516088 ~ 69516360 (+) |
| G1405170 | NA | non-coding | downstream | 87716 | 69516557 ~ 69517010 (+) |
| G1405171 | NA | non-coding | downstream | 88756 | 69517597 ~ 69517962 (+) |
| G1404827 | NA | other | upstream | 58684 | 69364521 ~ 69369376 (+) |
| G1404785 | NA | other | upstream | 174351 | 69245545 ~ 69253709 (+) |
| G1404700 | NA | other | upstream | 314710 | 69109714 ~ 69113350 (+) |
| G1404281 | LOC106566460 | other | upstream | 746083 | 68681446 ~ 68681977 (+) |
| G1405216 | NA | other | downstream | 151888 | 69580729 ~ 69583626 (+) |
| G1405218 | NA | other | downstream | 157148 | 69585989 ~ 69586906 (+) |
| G1405310 | LOC106566443 | other | downstream | 242623 | 69671464 ~ 69672674 (+) |
| G1405605 | LOC106566425 | other | downstream | 701080 | 70129921 ~ 70132301 (+) |
| G1405676 | NA | other | downstream | 827981 | 70256822 ~ 70257430 (+) |
