LOC110491170 (LOC106566448)


Basic Information

Item Value
gene id LOC110491170
gene name LOC106566448
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 69470416 ~ 69506016 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036947667.1
CCGGTACTCTCACCTTCCCGCTTTTACGCGAAAACACTACATGTGTTTTCTCAACGGGATTTTAATATAGTGCGGTGTTTCTGCAGATGCAGAAAAAAACAGGTTATTGACATTACACAATATGGAGCTGAATTTTACACAGAGAGGGCGCGACATTCTAGAGTTACGCGCGCTGGCGCAGAAACTTCTGACTCGGGGGAACAACTACTCTCTGCGTCTGGAGAACTACTCTCTGTTTGACAACGGATCGGAGCTCGATCAGGAGGACTCATTGGACGTCAACACTAACATCTACTCTAAGGTCCTGGTCACTGTGATCTATATCGCGCTCTTTGCCGTCGGCTGCTTAGGGAACTCTGTTACGCTATACACCCTGGTGACCAAGAAGTCCCTCCAGAATATCCAAAGTACTGTCCACTACCACCTGTCCAGTCTCGCCGTCTCCGACCTGCTAATACTAGTCCTCAGCATGCCCGTCGAGCTATATAATTTCATCTGGGTCCATCATCCTTGGGCGTTCGGAGGAGTTGTTTGTAAAGGCTACTATTTCATTCGGGATGCCTGCTCGTATGCCACGGCGTTCAACATCGCCAGCCTCAGCGTCGAGCGTTATATGGCGATATGCCACCCTTTCAAGGCGAAGAGCATCATGTCCTGCAGCCGCACCAAAAAGCTGATCAGCGGGATGTGGGTGGCTTCGTTTCTCCTGGCCTCTCCGATGCTCTTCACCATGGGACAGAAGTATCATGGACCccaacgggagaagatatgcacCACCATCGTGCCTCCTGTCGTATTGAAGATAGTGATTCAGGTGAATGTGTTCCTGTCCTTTGTGGTTCCCATGGTAGCCATATCTGTTCTGAACGGGGTCATCGCCAGTCAGCTGCTGCATATGTTCAGAGAGAAGCAGCAGGACAACCGCATCTGCATCGTCGAGGGTAACCCTACCATGCTGAGCGTTGCTGTGGAGCCAAACCGCACACAGTCGCTGCGTCATGGAGTCATGGTTCTACgggctGTGGTTGTTGCCTTTGTGGTTTGCTATCTACCCTACTACATCCGGCGCCTCATGTACTGCTACGCAGAGTTTACAGAGGAAGGATATGATTACTACCACTACTTCTTCATGGTGACCAACGTCCTCTTCTACGTGAGCTCAGCTGTCAACCCAGTCCTCTACAACCTGGTCTCAGCCAACTACCGGGAGATCTTCTTCAACACGCTCCGCTGCTTCTGCGTGCCGTGTCGTCGCAAGAAACAGAGCCGTGTTCTGATCAGACACTCCACCAGCATCTCCAGTAACCACACCTTCTCCTCCAACATCATCAAGGAGACCGTCTACTgaccaccccccccaaaaaaaacactcCCCTGATAACATTCCATTTTAGAACTGCAGTGTATGGAATCTATTACCCAGTTGGACTCCATGTATGTTTGATGGGGAGCCTGGTACTGTGAATCACTGACACATTGTgccacataaacacacaaacaaatatcCACAATTTGATATATTGGTGCAATCatctgaaagaaagaaagaataagGGCGTAGATCactcaaattacaaaatgacattgGTTTCCTGTAAGCAGTCAATGGAcgaggtatgacagcaatccatgctttggctTAGTTTTCACATGCTAACAATTTAGCATTTGTTAGCACATTCAATTCATGGGACCGATATTAGCATTTGTCGTGCATCGTGTTCAAATCGTATGTCTGACTTTGTTGAGATATACAATCAATTTTGGGCACTTTTGAACATGATGTGCAAA

Function

NR:

description
neurotensin receptor type 1-like

GO: NA

KEGG:

id description
K04211 NTSR1; neurotensin receptor 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036947667.1 True 1791 mRNA 0.48 4 69470416 69506016

Neighbor

gene id symbol gene type direction distance location
LOC110492644 LOC106566447 coding downstream 91235 69354502 ~ 69379181 (-)
LOC110492636 LOC106566437 coding downstream 346950 69113016 ~ 69123466 (-)
LOC110492630 LOC106566458 coding downstream 552990 68915576 ~ 68917426 (-)
LOC110491168 LOC106566483 coding downstream 574296 68894981 ~ 68896120 (-)
LOC118939478 LOC106566484 coding downstream 677088 68791189 ~ 68795025 (-)
LOC118939576 NA coding upstream 65837 69571853 ~ 69575843 (-)
LOC110491172 LOC106566442 coding upstream 71658 69577674 ~ 69666017 (-)
LOC118936543 LOC106566425 coding upstream 621237 70127253 ~ 70133280 (-)
LOC118939578 NA coding upstream 679359 70185375 ~ 70187858 (-)
LOC110492660 LOC106566428 coding upstream 710522 70216538 ~ 70221552 (-)
G1405138 NA non-coding downstream 1540 69468357 ~ 69468876 (-)
G1405107 NA non-coding downstream 14960 69455186 ~ 69455456 (-)
G1405104 NA non-coding downstream 20852 69449262 ~ 69449564 (-)
G1405076 NA non-coding downstream 46929 69423238 ~ 69423487 (-)
G1405067 NA non-coding downstream 54239 69415976 ~ 69416177 (-)
G1405184 NA non-coding upstream 20693 69526709 ~ 69526933 (-)
G1405252 NA non-coding upstream 40389 69546405 ~ 69588880 (-)
G1405281 NA non-coding upstream 106420 69612436 ~ 69619436 (-)
G1405292 NA non-coding upstream 138003 69644019 ~ 69644846 (-)
G1405016 nsfl1c other downstream 190057 69277827 ~ 69280359 (-)
G1404974 LOC106566438 other downstream 263258 69203286 ~ 69207158 (-)
G1403498 NA other downstream 2026237 67443421 ~ 67444179 (-)
G1402707 LOC106566505 other downstream 2975749 66484901 ~ 66494667 (-)
G1405172 NA other upstream 11739 69517755 ~ 69518113 (-)
G1405917 NA other upstream 572641 70078657 ~ 70095541 (-)
G1406228 NA other upstream 1229631 70735647 ~ 70742179 (-)
G1406514 NA other upstream 1754306 71260322 ~ 71260817 (-)

Expression


Co-expression Network