LOC118939576


Basic Information

Item Value
gene id LOC118939576
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 69571853 ~ 69575843 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005036611.1
tgctcaggatcacctggcgtctctctgctcaggatcacctggccctctctgctcaggatcacctggccctctctgctcaggatcacctggcgtctctctgctcaggatcacctggccctctctgctcTGGCTGAAAAACATTGTCACGTAAGGTGTTCAGGAAATGAAGGAGATGGGCAGTGTTGTATGGTTCAAGGGTGGCATGGCGGTGGAGGACCCCATTATGGCTCATGGCTGGGCATGTGGGGACATTTCCCCCGTGCTGGCCAGGCACCTTAATGATGGCGCGTTGACCAATGatgtcccttcctctcctcctcgacTTCACTAAATGGAATCCAGCCTCATCTATGAATGAGTTCCTGGGGGATGGGACTTGCGTCCATCTCCAtgattctctaaaatgacagaaAATACTATAATTGCTGTATGGTAAAGTTCACTGGCAACATCAACGAGTCTCTAATGTTTCTAGAGTGTAATACCAGAACATTACGCACACATTCCTACTATTTATCCTTCACTCTTCACTCAATCTGGTGATTCCTTTCCAATATGACTCTGTAGATGTGCTTCATCTGGAGATGGTGTTTGTTAAGGATGGGGTCTGTGGTTGATAAACTCTctctgatgttatggaagatgccAGGGTTACAGCCTCCTGTTTGTCTGTAAATAGACATGTACGTACGTGGTGGTCGTCTTTCAGTTCTATAACAACTAAAtagcatacagtacagtaaacactacagtaatacagtatacaagATAAACATGTTACAAAGTAGTATAGCTCCCAATTTCATACATACAGTAAGTAATACATGAACCATTTACTTTGTTTCCCTTTACAGTATGTATTGGAATCTACAGTCTTTACTGTGCTTTATGTTGTACTACTGTCAAGTAGTAAAAGTAGAAGAGAGGTCCAATGTCTGCAGTACAAACCTCTTCTCATTGTGGAACGTCCGGATGATGGATGCTACGGGGAAGTGGCTCAGATTGGGCTGCACTCTCTGCACAGCCTCTCTCAAggtcaaaccatggttgaccacatGGTCTGCCCAGCATCTCTCAAGGTCAAGCCATGGTTGACCACATGGtctgcccagcctctctcaaGGTCAAACCACGGTTGACTACATGGTCTGCCCAGCCTCTCAAggtcaaaccatggttgaccacatGGTCCACCACAGTCGCCGAGACTCTTGTTCTCCTTGTTCTTGGTCTTCCTTATTCCTCACCTCTATCTCCAACTCTCCCTGCTAAGTTTGCTTCCATTGTTCTCCAAACACAGGAGTACTCACCTGTGGTCTTGTTGTCCATACCAAAAGGTTTGAGTGCAAAGTTGAACATTTATGCAAATCGTGTTTGAACATGTGGAGAGTGAAAATGATCAATTGGTAATTGAGCTTAGCTTGTTGAACAGTGTTGCTTTTCATTTGAACACAAGAGATTTTAGTTGTCAAGGTTTTGCCAAAATGTTTTGCCAAATGTTGGTTATAGAATTTCAATCTGTGCCAGTAGTATTGCAGATTTGGTTTTCTGCTTCTGCTAAATGGGTTACATATTTGGGTCATTGTGCCTCATGGGCCAGTTTTAGTGTGTTAACAATTGGGAAAAACTGTCAGTATTATTTTGCAAACCCTGTGACAATGTGAAAGAAAACTATTCAAACTCAGGCTCAATGGTTGTTTCCCATAGTGACATTAAAGTAAAACTCCACACACAAACCATATTTTGGTATTTATTTagttagtccattgttgatataatCCTAAAATGTTTTGCacgtcagcaatcaagttttaaAGAAacataactttcaaaatacagaaatacagccggtatgatGCCATTTTAATTATATATTGCAAAACGCTGCATCATGTAATTCAAAATGCATCACAACGGCTGTATCTCCAAAAAGCGTTTCGGTGTCATTTTCCTTTAAGTGCTGAGAGGGAATGTATTTCATACTCATTCAGCTGTACTTATTGACAGTAGCCAGACACACAGATGTCCTGTATAACAAAATATTCATTAGGTCAACAGTTGACCCCAAAGCAAAGGCAACAATTTCCTAAATGATAGATAATTGTGGCACTATTGTAAGACCAGACACTGATAGAGACCATCATCTGGAATAGAAACAGAGTTTTAAAGGGTTTCCACAGACAAATATACCCTTCCCCATTACAGACAGTAGTCATCTACCCTTCCACTTTACAGACAGTAGTCATCTACCCTTCCCCTTTAAAGACAGTAGTCATCTACCCTTCCCCTTTAAAGACAGTAGTCATCTACCCTTCCCCTTTAAAGACAGTAGTCATCTACCCTTCCACTTTACAGACAGTAGTCATCTACCCTTCCCCTTTAAAGACAGTAGTCATCTACCCTTCCCCTTTATAGACAGTAGTCATCTACCCTTCCACTTTACAGACAGTAGTCATCTACCCTTCCCCTTTAAAGACAGTAGTCATCTACCCTTCCCCTTTATAGACAGTAGTCATCTACCCTTCCCTTTTAAAGACAGTAGTCATCTACCCTTCCCCTTTAAAGACAGTAGTCATCTACCCTTCCCCTTAATAGACAGTAGTCATCTACCCTTCCCCTTTAAAGACAGTAGTCATCTACCCTTCCCCTTTAAAGACAGTAGTCATCTACCCTTCCCCTTAATAGACAGTAGTCATCTACCCTTCCCCTTTATAGACAGTATTCATTGACCCTTCCCCTTTAAAGACAGTAGTCATCTACCCTTCCCCTTTAAAGACAGTAGTCATCTACCCTTCCCCTTTAAAGACAGTAGTCATCTACCCTTCCCCTTTAAAGACAGTAGTCATCTACCCTTCCCCTTTATAGACAGTAGTCATCTACCCTTCCCCTTTATAGACAGTAGTCATCTACCCTTCCCCTTTAAAGACAGTAGTCATCTACCCTTCCCCTTTATAGACAGTATTCATTGACCCTTCCCCTTTAAAGACAGTAGTAATCTACCCTTCCCCTTTATAGACAGTATTCATTGACCCTTCCCCTTTATAGACAGTAGTCATCTACCCTTCCCCTTTAAAGACAGTAGTCATCTACCCTTCCCCTTTAAATACAGTAGTCATCTACCCTTCCCCTTTATAGACAGTATTCATTGACCCTTCCCCTTTATAGACAGTAGTCATCTACCCTTCCCCTTTACAGACAGTAGTCATCTACCCTTCCCCTTTAAAGACAGTAGTCATCTACCCTTCCCCTTTAAAGACAGTAGTAATCTACCCTTCAGCATCAATATACCATTTAACAAAACAGTAGCCGTATATGaaggacccccccccctcctgattACCAGGTttgaggtcaattccatttaattcCCAGTTAATTCAGAAAGTAGACCAAATTCCAAATGGTCCTCATTGAAATACATTGAAGATAACTGGGATTTCAGTGCACATCCTTATATGACtgaaatttaaatggaattgacctccGGCCCCCCTGTTTACCACTAGCAAGATCAAAACGGTGAGTAACTCCATTACTCAGCCACACAAACATCAGAGCACACAACCCCTTCATACAAAACTGTGCGTTTTAATAGGATTTGAGACTGTCAAATGTGACCCGTTACTGTGTGGGGGGTATTCTGTTTCTTCTAATAGTTGGTGTTGTGAAGGATTTTCTGTGTATGTGAATCTGTTGTCATAAGCACCTTGCCTTGGTCCTCCAGATAGTGGTTCTGGATGGGGACAACAAGCACATTGTGAAGAAATGGCTTAGCAATGCAATCTTACTATAAGACTGAAAATAGTTTTTATGGGCAGAATTTGAATGTTTTTTAAACAAAATAAAAGTTGTAAAAGGA

Function

NR:

description
PREDICTED: uncharacterized protein LOC107395943

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005036611.1 True 3859 mRNA 0.42 2 69571853 69575843

Neighbor

gene id symbol gene type direction distance location
LOC110491170 LOC106566448 coding downstream 65837 69470416 ~ 69506016 (-)
LOC110492644 LOC106566447 coding downstream 192672 69354502 ~ 69379181 (-)
LOC110492636 LOC106566437 coding downstream 448387 69113016 ~ 69123466 (-)
LOC110492630 LOC106566458 coding downstream 654427 68915576 ~ 68917426 (-)
LOC110491168 LOC106566483 coding downstream 675733 68894981 ~ 68896120 (-)
LOC110491172 LOC106566442 coding upstream 1831 69577674 ~ 69666017 (-)
LOC118936543 LOC106566425 coding upstream 551410 70127253 ~ 70133280 (-)
LOC118939578 NA coding upstream 609532 70185375 ~ 70187858 (-)
LOC110492660 LOC106566428 coding upstream 640695 70216538 ~ 70221552 (-)
LOC110492649 LOC106566409 coding upstream 653996 70229839 ~ 70282239 (-)
G1405184 NA non-coding downstream 44920 69526709 ~ 69526933 (-)
G1405138 NA non-coding downstream 102977 69468357 ~ 69468876 (-)
G1405107 NA non-coding downstream 116397 69455186 ~ 69455456 (-)
G1405104 NA non-coding downstream 122289 69449262 ~ 69449564 (-)
G1405076 NA non-coding downstream 148366 69423238 ~ 69423487 (-)
G1405281 NA non-coding upstream 36593 69612436 ~ 69619436 (-)
G1405292 NA non-coding upstream 68176 69644019 ~ 69644846 (-)
G1405297 NA non-coding upstream 80879 69656722 ~ 69657089 (-)
G1405401 LOC106566443 non-coding upstream 96160 69672003 ~ 69673550 (-)
G1405172 NA other downstream 53740 69517755 ~ 69518113 (-)
G1405016 nsfl1c other downstream 291494 69277827 ~ 69280359 (-)
G1404974 LOC106566438 other downstream 364695 69203286 ~ 69207158 (-)
LOC118939478 LOC106566484 other downstream 776828 68791189 ~ 68795025 (-)
G1403498 NA other downstream 2127674 67443421 ~ 67444179 (-)
G1405917 NA other upstream 502814 70078657 ~ 70095541 (-)
G1406228 NA other upstream 1159804 70735647 ~ 70742179 (-)
G1406514 NA other upstream 1684479 71260322 ~ 71260817 (-)
G1406752 NA other upstream 1926636 71501118 ~ 71547366 (-)

Expression


Co-expression Network