LOC118939578


Basic Information

Item Value
gene id LOC118939578
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 70185375 ~ 70187858 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005036612.1
ctctctaccttgtcTATATgtagtcccctctctctaccttgtcTCTATgtagtcccctctctctaccttgtcTCTATGaagccacctctctctaccttgtCTCTATgaagctcctgtctctctccaacAGAGTCTTATGTCCTCCTGCGTATATGGAAGAGGTGGTTGACCTTTGACCTTTCCTCCCCGTCGACTAGCAGTGATGTCACACCGTCCTTGCTTTATTAACACTCCCCAGAGGACCAAAGAGGACAGCATGTAGACTGAATACTTTTTTAAAGCTATACTTGTGTgctcaacacacaacacactacatTGCTAGCATGGAAAGAGACTGAGCGATAAGGAAACCAGGTCATTACCAAGCCAACTCAACAAATGTAGGGGTATGTTGTCATTgacctgagccctaggaccatgcctcaggactacctgacatgatgactccttgctgtcccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005036612.1 True 459 mRNA 0.47 3 70185375 70187858

Neighbor

gene id symbol gene type direction distance location
LOC118936543 LOC106566425 coding downstream 52095 70127253 ~ 70133280 (-)
LOC110491172 LOC106566442 coding downstream 519358 69577674 ~ 69666017 (-)
LOC118939576 NA coding downstream 609532 69571853 ~ 69575843 (-)
LOC110491170 LOC106566448 coding downstream 679359 69470416 ~ 69506016 (-)
LOC110492644 LOC106566447 coding downstream 806194 69354502 ~ 69379181 (-)
LOC110492660 LOC106566428 coding upstream 28680 70216538 ~ 70221552 (-)
LOC110492649 LOC106566409 coding upstream 41981 70229839 ~ 70282239 (-)
tmed4 LOC106566412 coding upstream 234571 70422429 ~ 70426035 (-)
LOC118939579 NA coding upstream 270063 70455694 ~ 70552795 (-)
LOC110492786 LOC105023799 coding upstream 353692 70541550 ~ 70754162 (-)
G1405958 NA non-coding downstream 47638 70137387 ~ 70137737 (-)
G1405919 NA non-coding downstream 50275 70134770 ~ 70135100 (-)
G1405933 NA non-coding downstream 59081 70126051 ~ 70126294 (-)
G1405918 NA non-coding downstream 71494 70112899 ~ 70113881 (-)
G1405954 NA non-coding downstream 78413 70104852 ~ 70106962 (-)
G1405985 NA non-coding upstream 35304 70223162 ~ 70226004 (-)
G1406075 NA non-coding upstream 201750 70389608 ~ 70394300 (-)
G1406091 LOC106566414 non-coding upstream 264377 70452235 ~ 70453318 (-)
G1406097 NA non-coding upstream 266029 70453887 ~ 70456223 (-)
G1405917 NA other downstream 89834 70078657 ~ 70095541 (-)
G1405172 NA other downstream 667262 69517755 ~ 69518113 (-)
G1405016 nsfl1c other downstream 905016 69277827 ~ 69280359 (-)
G1404974 LOC106566438 other downstream 978217 69203286 ~ 69207158 (-)
LOC118939478 LOC106566484 other downstream 1390350 68791189 ~ 68795025 (-)
G1406228 NA other upstream 547789 70735647 ~ 70742179 (-)
G1406514 NA other upstream 1072464 71260322 ~ 71260817 (-)
G1406752 NA other upstream 1314621 71501118 ~ 71547366 (-)
G1406760 NA other upstream 1352100 71539958 ~ 71543469 (-)

Expression


Co-expression Network