trnat-agu-10


Basic Information

Item Value
gene id trnat-agu-10
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 70918584 ~ 70918657 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnat-agu-10
ggcgctgtggcttagttggttaaagcgcctgtctagtaaacaggagatcctgagttcgaatctcagcagagcct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnat-agu-10 True 74 mRNA 0.46 1 70918584 70918657

Neighbor

gene id symbol gene type direction distance location
trnat-agu-9 NA coding upstream 3113 70915398 ~ 70915471 (+)
trnat-agu-8 NA coding upstream 4175 70914336 ~ 70914409 (+)
trnat-agu-7 NA coding upstream 5237 70913274 ~ 70913347 (+)
trnat-agu-6 NA coding upstream 8423 70910088 ~ 70910161 (+)
si:ch211-71n6.4 pnba coding upstream 26768 70867461 ~ 70891816 (+)
trnat-agu-11 NA coding downstream 989 70919646 ~ 70919719 (+)
trnat-agu-12 NA coding downstream 4175 70922832 ~ 70922905 (+)
trnat-agu-13 NA coding downstream 6298 70924955 ~ 70925028 (+)
trnat-agu-14 NA coding downstream 7359 70926016 ~ 70926089 (+)
trnat-agu-15 NA coding downstream 8421 70927078 ~ 70927151 (+)
G1406366 NA non-coding upstream 12858 70905291 ~ 70905726 (+)
G1406362 NA non-coding upstream 17125 70901026 ~ 70901459 (+)
G1406357 NA non-coding upstream 19348 70898403 ~ 70899236 (+)
G1406354 NA non-coding upstream 21913 70895693 ~ 70896671 (+)
G1406350 NA non-coding upstream 25720 70892431 ~ 70892864 (+)
trnat-agu-21 NA non-coding downstream 19452 70938109 ~ 70938372 (+)
G1406411 NA non-coding downstream 173248 71091905 ~ 71092173 (+)
G1406447 NA non-coding downstream 233792 71152449 ~ 71153222 (+)
G1406453 NA non-coding downstream 251023 71169680 ~ 71170260 (+)
G1406459 NA non-coding downstream 265885 71184542 ~ 71185729 (+)
G1405676 NA other upstream 661154 70256822 ~ 70257430 (+)
G1405605 LOC106566425 other upstream 786283 70129921 ~ 70132301 (+)
G1405310 LOC106566443 other upstream 1245910 69671464 ~ 69672674 (+)
G1405218 NA other upstream 1331678 69585989 ~ 69586906 (+)
G1405216 NA other upstream 1334958 69580729 ~ 69583626 (+)
G1406381 NA other downstream 50958 70969615 ~ 70972604 (+)
G1406424 NA other downstream 283785 71202442 ~ 71206092 (+)
G1406505 NA other downstream 291615 71210272 ~ 71210764 (+)
G1406507 NA other downstream 295720 71214377 ~ 71216430 (+)
G1406508 NA other downstream 326916 71245573 ~ 71246023 (+)

Expression


Co-expression Network