trnat-agu-12


Basic Information

Item Value
gene id trnat-agu-12
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 70922832 ~ 70922905 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnat-agu-12
ggcgctgtggcttagttggttaaagcgcctgtctagtaaacaggagatcctgagttcgaatctcagcagagcct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnat-agu-12 True 74 mRNA 0.51 1 70922832 70922905

Neighbor

gene id symbol gene type direction distance location
trnat-agu-11 NA coding upstream 3113 70919646 ~ 70919719 (+)
trnat-agu-10 NA coding upstream 4175 70918584 ~ 70918657 (+)
trnat-agu-9 NA coding upstream 7361 70915398 ~ 70915471 (+)
trnat-agu-8 NA coding upstream 8423 70914336 ~ 70914409 (+)
trnat-agu-7 NA coding upstream 9485 70913274 ~ 70913347 (+)
trnat-agu-13 NA coding downstream 2050 70924955 ~ 70925028 (+)
trnat-agu-14 NA coding downstream 3111 70926016 ~ 70926089 (+)
trnat-agu-15 NA coding downstream 4173 70927078 ~ 70927151 (+)
trnat-agu-16 NA coding downstream 5235 70928140 ~ 70928213 (+)
trnat-agu-17 NA coding downstream 6297 70929202 ~ 70929275 (+)
G1406366 NA non-coding upstream 17106 70905291 ~ 70905726 (+)
G1406362 NA non-coding upstream 21373 70901026 ~ 70901459 (+)
G1406357 NA non-coding upstream 23596 70898403 ~ 70899236 (+)
G1406354 NA non-coding upstream 26161 70895693 ~ 70896671 (+)
G1406350 NA non-coding upstream 29968 70892431 ~ 70892864 (+)
trnat-agu-21 NA non-coding downstream 15204 70938109 ~ 70938372 (+)
G1406411 NA non-coding downstream 169000 71091905 ~ 71092173 (+)
G1406447 NA non-coding downstream 229544 71152449 ~ 71153222 (+)
G1406453 NA non-coding downstream 246775 71169680 ~ 71170260 (+)
G1406459 NA non-coding downstream 261637 71184542 ~ 71185729 (+)
G1405676 NA other upstream 665402 70256822 ~ 70257430 (+)
G1405605 LOC106566425 other upstream 790531 70129921 ~ 70132301 (+)
G1405310 LOC106566443 other upstream 1250158 69671464 ~ 69672674 (+)
G1405218 NA other upstream 1335926 69585989 ~ 69586906 (+)
G1405216 NA other upstream 1339206 69580729 ~ 69583626 (+)
G1406381 NA other downstream 46710 70969615 ~ 70972604 (+)
G1406424 NA other downstream 279537 71202442 ~ 71206092 (+)
G1406505 NA other downstream 287367 71210272 ~ 71210764 (+)
G1406507 NA other downstream 291472 71214377 ~ 71216430 (+)
G1406508 NA other downstream 322668 71245573 ~ 71246023 (+)

Expression


Co-expression Network