trnat-agu-18



Basic Information


Item Value
gene id trnat-agu-18
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 70930264 ~ 70930337 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>trnat-agu-18
ggcgctgtggcttagttggttaaagcgcctgtctagtaaacaggagatcctgagttcgaatctcagcagagcct

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
trnat-agu-18 True 74 mRNA 0.46 1 70930264 70930337

Neighbor


gene id symbol gene type direction distance location
trnat-agu-17 NA coding upstream 989 70929202 ~ 70929275 (+)
trnat-agu-16 NA coding upstream 2051 70928140 ~ 70928213 (+)
trnat-agu-15 NA coding upstream 3113 70927078 ~ 70927151 (+)
trnat-agu-14 NA coding upstream 4175 70926016 ~ 70926089 (+)
trnat-agu-13 NA coding upstream 5236 70924955 ~ 70925028 (+)
trnat-agu-19 NA coding downstream 989 70931326 ~ 70931399 (+)
trnat-agu-20 NA coding downstream 3132 70933469 ~ 70933542 (+)
trnat-cgu-7 NA coding downstream 5256 70907337 ~ 70935898 (+)
trnat-agu-21 NA coding downstream 7812 70938109 ~ 70938372 (+)
trnat-cgu-8 NA coding downstream 9955 70940292 ~ 70940365 (+)
G1406366 NA non-coding upstream 24538 70905291 ~ 70905726 (+)
G1406362 NA non-coding upstream 28805 70901026 ~ 70901459 (+)
G1406357 NA non-coding upstream 31028 70898403 ~ 70899236 (+)
G1406354 NA non-coding upstream 33593 70895693 ~ 70896671 (+)
G1406350 NA non-coding upstream 37400 70892431 ~ 70892864 (+)
G1406411 NA non-coding downstream 161568 71091905 ~ 71092173 (+)
G1406447 NA non-coding downstream 222112 71152449 ~ 71153222 (+)
G1406453 NA non-coding downstream 239343 71169680 ~ 71170260 (+)
G1406459 NA non-coding downstream 254205 71184542 ~ 71185729 (+)
G1405676 NA other upstream 672834 70256822 ~ 70257430 (+)
G1405605 LOC106566425 other upstream 797963 70129921 ~ 70132301 (+)
G1405310 LOC106566443 other upstream 1257590 69671464 ~ 69672674 (+)
G1405218 NA other upstream 1343358 69585989 ~ 69586906 (+)
G1405216 NA other upstream 1346638 69580729 ~ 69583626 (+)
G1406381 NA other downstream 39278 70969615 ~ 70972604 (+)
G1406424 NA other downstream 272105 71202442 ~ 71206092 (+)
G1406505 NA other downstream 279935 71210272 ~ 71210764 (+)
G1406507 NA other downstream 284040 71214377 ~ 71216430 (+)
G1406508 NA other downstream 315236 71245573 ~ 71246023 (+)

Expression



Co-expression Network