trnat-cgu-8


Basic Information

Item Value
gene id trnat-cgu-8
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 70940292 ~ 70940365 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnat-cgu-8
ggcgctctggcttagttggttaaagcgcctgtctcgtaaacaggagatcctgagttcaaatctcagcagagcct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnat-cgu-8 True 74 mRNA 0.56 1 70940292 70940365

Neighbor

gene id symbol gene type direction distance location
trnat-agu-21 NA coding upstream 2070 70938109 ~ 70938372 (+)
trnat-cgu-7 NA coding upstream 4626 70907337 ~ 70935898 (+)
trnat-agu-20 NA coding upstream 6750 70933469 ~ 70933542 (+)
trnat-agu-19 NA coding upstream 8893 70931326 ~ 70931399 (+)
trnat-agu-18 NA coding upstream 9955 70930264 ~ 70930337 (+)
trnat-agu-22 NA coding downstream 974 70941339 ~ 70941412 (+)
trnat-agu-23 NA coding downstream 2483 70942848 ~ 70942921 (+)
trnat-cgu-9 NA coding downstream 3545 70943910 ~ 70943983 (+)
trnat-cgu-10 NA coding downstream 4607 70944972 ~ 70945045 (+)
trnat-agu-24 NA coding downstream 5669 70946034 ~ 70946107 (+)
G1406366 NA non-coding upstream 34566 70905291 ~ 70905726 (+)
G1406362 NA non-coding upstream 38833 70901026 ~ 70901459 (+)
G1406357 NA non-coding upstream 41056 70898403 ~ 70899236 (+)
G1406411 NA non-coding downstream 151540 71091905 ~ 71092173 (+)
G1406447 NA non-coding downstream 212084 71152449 ~ 71153222 (+)
G1406453 NA non-coding downstream 229315 71169680 ~ 71170260 (+)
G1406459 NA non-coding downstream 244177 71184542 ~ 71185729 (+)
LOC118939582 LOC106566316 non-coding downstream 251159 71103181 ~ 71193739 (+)
G1405676 NA other upstream 682862 70256822 ~ 70257430 (+)
G1405605 LOC106566425 other upstream 807991 70129921 ~ 70132301 (+)
G1405310 LOC106566443 other upstream 1267618 69671464 ~ 69672674 (+)
G1405218 NA other upstream 1353386 69585989 ~ 69586906 (+)
G1405216 NA other upstream 1356666 69580729 ~ 69583626 (+)
G1406381 NA other downstream 29250 70969615 ~ 70972604 (+)
G1406424 NA other downstream 262077 71202442 ~ 71206092 (+)
G1406505 NA other downstream 269907 71210272 ~ 71210764 (+)
G1406507 NA other downstream 274012 71214377 ~ 71216430 (+)
G1406508 NA other downstream 305208 71245573 ~ 71246023 (+)

Expression


Co-expression Network