trnat-cgu-10


Basic Information

Item Value
gene id trnat-cgu-10
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 70944972 ~ 70945045 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnat-cgu-10
ggcgctgtggcttagttggttaaagcgcctgtctcgtaaacaggagatcctgagttcaaatctcagcagagcct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnat-cgu-10 True 74 mRNA 0.51 1 70944972 70945045

Neighbor

gene id symbol gene type direction distance location
trnat-cgu-9 NA coding upstream 989 70943910 ~ 70943983 (+)
trnat-agu-23 NA coding upstream 2051 70942848 ~ 70942921 (+)
trnat-agu-22 NA coding upstream 3560 70941339 ~ 70941412 (+)
trnat-cgu-8 NA coding upstream 4607 70940292 ~ 70940365 (+)
trnat-agu-21 NA coding upstream 6750 70938109 ~ 70938372 (+)
trnat-agu-24 NA coding downstream 989 70946034 ~ 70946107 (+)
trnat-cgu-11 NA coding downstream 2051 70947096 ~ 70947169 (+)
trnat-agu-25 NA coding downstream 3113 70948158 ~ 70948231 (+)
trnat-cgu-12 NA coding downstream 4175 70949220 ~ 70949293 (+)
trnat-cgu-13 NA coding downstream 5237 70950282 ~ 70950355 (+)
trnat-cgu-7 NA non-coding upstream 9074 70907337 ~ 70935898 (+)
G1406366 NA non-coding upstream 39246 70905291 ~ 70905726 (+)
G1406362 NA non-coding upstream 43513 70901026 ~ 70901459 (+)
G1406357 NA non-coding upstream 45736 70898403 ~ 70899236 (+)
G1406411 NA non-coding downstream 146860 71091905 ~ 71092173 (+)
G1406447 NA non-coding downstream 207404 71152449 ~ 71153222 (+)
G1406453 NA non-coding downstream 224635 71169680 ~ 71170260 (+)
G1406459 NA non-coding downstream 239497 71184542 ~ 71185729 (+)
LOC118939582 LOC106566316 non-coding downstream 246479 71103181 ~ 71193739 (+)
G1405676 NA other upstream 687542 70256822 ~ 70257430 (+)
G1405605 LOC106566425 other upstream 812671 70129921 ~ 70132301 (+)
G1405310 LOC106566443 other upstream 1272298 69671464 ~ 69672674 (+)
G1405218 NA other upstream 1358066 69585989 ~ 69586906 (+)
G1405216 NA other upstream 1361346 69580729 ~ 69583626 (+)
G1406381 NA other downstream 24570 70969615 ~ 70972604 (+)
G1406424 NA other downstream 257397 71202442 ~ 71206092 (+)
G1406505 NA other downstream 265227 71210272 ~ 71210764 (+)
G1406507 NA other downstream 269332 71214377 ~ 71216430 (+)
G1406508 NA other downstream 300528 71245573 ~ 71246023 (+)

Expression


Co-expression Network