trnat-cgu-11


Basic Information

Item Value
gene id trnat-cgu-11
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 70947096 ~ 70947169 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnat-cgu-11
ggcgctgtggcttagttggttaaagcgcctgtctcgtaaacaggagatcctgagttcaaatctcagcagagcct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnat-cgu-11 True 74 mRNA 0.51 1 70947096 70947169

Neighbor

gene id symbol gene type direction distance location
trnat-agu-24 NA coding upstream 989 70946034 ~ 70946107 (+)
trnat-cgu-10 NA coding upstream 2051 70944972 ~ 70945045 (+)
trnat-cgu-9 NA coding upstream 3113 70943910 ~ 70943983 (+)
trnat-agu-23 NA coding upstream 4175 70942848 ~ 70942921 (+)
trnat-agu-22 NA coding upstream 5684 70941339 ~ 70941412 (+)
trnat-agu-25 NA coding downstream 989 70948158 ~ 70948231 (+)
trnat-cgu-12 NA coding downstream 2051 70949220 ~ 70949293 (+)
trnat-cgu-13 NA coding downstream 3113 70950282 ~ 70950355 (+)
trnat-cgu-14 NA coding downstream 4175 70951344 ~ 70951417 (+)
trnat-agu-26 NA coding downstream 5237 70952406 ~ 70952479 (+)
trnat-agu-21 NA non-coding upstream 8724 70938109 ~ 70938372 (+)
trnat-cgu-7 NA non-coding upstream 11198 70907337 ~ 70935898 (+)
G1406366 NA non-coding upstream 41370 70905291 ~ 70905726 (+)
G1406362 NA non-coding upstream 45637 70901026 ~ 70901459 (+)
G1406357 NA non-coding upstream 47860 70898403 ~ 70899236 (+)
G1406411 NA non-coding downstream 144736 71091905 ~ 71092173 (+)
G1406447 NA non-coding downstream 205280 71152449 ~ 71153222 (+)
G1406453 NA non-coding downstream 222511 71169680 ~ 71170260 (+)
G1406459 NA non-coding downstream 237373 71184542 ~ 71185729 (+)
LOC118939582 LOC106566316 non-coding downstream 244355 71103181 ~ 71193739 (+)
G1405676 NA other upstream 689666 70256822 ~ 70257430 (+)
G1405605 LOC106566425 other upstream 814795 70129921 ~ 70132301 (+)
G1405310 LOC106566443 other upstream 1274422 69671464 ~ 69672674 (+)
G1405218 NA other upstream 1360190 69585989 ~ 69586906 (+)
G1405216 NA other upstream 1363470 69580729 ~ 69583626 (+)
G1406381 NA other downstream 22446 70969615 ~ 70972604 (+)
G1406424 NA other downstream 255273 71202442 ~ 71206092 (+)
G1406505 NA other downstream 263103 71210272 ~ 71210764 (+)
G1406507 NA other downstream 267208 71214377 ~ 71216430 (+)
G1406508 NA other downstream 298404 71245573 ~ 71246023 (+)

Expression


Co-expression Network