trnat-agu-42


Basic Information

Item Value
gene id trnat-agu-42
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 70992314 ~ 70992387 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnat-agu-42
ggcgctgtggcttagttggttaaagcgcctgtctagtaaacaggagatcctgagttcgaatctcagcagagcct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnat-agu-42 True 74 mRNA 0.51 1 70992314 70992387

Neighbor

gene id symbol gene type direction distance location
trnat-agu-41 NA coding upstream 989 70991252 ~ 70991325 (+)
trnat-agu-40 NA coding upstream 2051 70990190 ~ 70990263 (+)
trnat-agu-39 NA coding upstream 3113 70989128 ~ 70989201 (+)
trnat-agu-38 NA coding upstream 4188 70988053 ~ 70988126 (+)
trnat-agu-37 NA coding upstream 5257 70986984 ~ 70987057 (+)
trnan-auu NA coding downstream 1006 70993393 ~ 70993463 (+)
trnan-auu-2 NA coding downstream 5330 70997717 ~ 70997787 (+)
LOC118939582 LOC106566316 coding downstream 110794 71103181 ~ 71193739 (+)
LOC118939583 NA coding downstream 204880 71196255 ~ 71198225 (+)
LOC110491184 LOC106572946 coding downstream 294159 71286546 ~ 71362472 (+)
trnat-agu-21 NA non-coding upstream 53942 70938109 ~ 70938372 (+)
trnat-cgu-7 NA non-coding upstream 56416 70907337 ~ 70935898 (+)
G1406366 NA non-coding upstream 86588 70905291 ~ 70905726 (+)
G1406362 NA non-coding upstream 90855 70901026 ~ 70901459 (+)
G1406357 NA non-coding upstream 93078 70898403 ~ 70899236 (+)
G1406411 NA non-coding downstream 99518 71091905 ~ 71092173 (+)
G1406447 NA non-coding downstream 160062 71152449 ~ 71153222 (+)
G1406453 NA non-coding downstream 177293 71169680 ~ 71170260 (+)
G1406459 NA non-coding downstream 192155 71184542 ~ 71185729 (+)
G1406381 NA other upstream 19710 70969615 ~ 70972604 (+)
G1405676 NA other upstream 734884 70256822 ~ 70257430 (+)
G1405605 LOC106566425 other upstream 860013 70129921 ~ 70132301 (+)
G1405310 LOC106566443 other upstream 1319640 69671464 ~ 69672674 (+)
G1405218 NA other upstream 1405408 69585989 ~ 69586906 (+)
G1406424 NA other downstream 210055 71202442 ~ 71206092 (+)
G1406505 NA other downstream 217885 71210272 ~ 71210764 (+)
G1406507 NA other downstream 221990 71214377 ~ 71216430 (+)
G1406508 NA other downstream 253186 71245573 ~ 71246023 (+)
G1406509 NA other downstream 258687 71251074 ~ 71251644 (+)

Expression


Co-expression Network