trnat-agu-44


Basic Information

Item Value
gene id trnat-agu-44
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 71004727 ~ 71004800 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnat-agu-44
ggtgctgtggcttagttggttaaagtgcctgtctagtaaacaggagatcctgagttcaaatctcagcagtacct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnat-agu-44 True 74 mRNA 0.46 1 71004727 71004800

Neighbor

gene id symbol gene type direction distance location
trnah-gug-30 NA coding downstream 285 71004371 ~ 71004442 (-)
trnat-agu-43 NA coding downstream 1303 71003351 ~ 71003424 (-)
LOC110492786 LOC105023799 coding downstream 250565 70541550 ~ 70754162 (-)
LOC118939579 NA coding downstream 546168 70455694 ~ 70552795 (-)
tmed4 LOC106566412 coding downstream 578692 70422429 ~ 70426035 (-)
trnah-gug-31 NA coding upstream 947 71005747 ~ 71005818 (-)
trnah-gug-32 NA coding upstream 2323 71007123 ~ 71007194 (-)
trnat-agu-45 NA coding upstream 2679 71007479 ~ 71007552 (-)
trnah-gug-33 NA coding upstream 3699 71008499 ~ 71008570 (-)
trnat-agu-46 NA coding upstream 4055 71008855 ~ 71008928 (-)
G1406388 NA non-coding downstream 15197 70962973 ~ 70989530 (-)
G1406367 NA non-coding downstream 98511 70905290 ~ 70906216 (-)
G1406365 NA non-coding downstream 100654 70903817 ~ 70904073 (-)
G1406364 NA non-coding downstream 102822 70901634 ~ 70901905 (-)
G1406361 NA non-coding downstream 103723 70900631 ~ 70901004 (-)
G1406407 NA non-coding upstream 68307 71073107 ~ 71076732 (-)
G1406416 NA non-coding upstream 90179 71094979 ~ 71095352 (-)
G1406419 NA non-coding upstream 93199 71097999 ~ 71098250 (-)
G1406421 NA non-coding upstream 94445 71099245 ~ 71099572 (-)
G1406482 NA non-coding upstream 152530 71157330 ~ 71157705 (-)
G1406228 NA other downstream 262548 70735647 ~ 70742179 (-)
LOC110492660 LOC106566428 other downstream 783471 70216538 ~ 70221552 (-)
G1405917 NA other downstream 909186 70078657 ~ 70095541 (-)
G1405172 NA other downstream 1486614 69517755 ~ 69518113 (-)
G1405016 nsfl1c other downstream 1724368 69277827 ~ 69280359 (-)
G1406514 NA other upstream 255522 71260322 ~ 71260817 (-)
G1406752 NA other upstream 497679 71501118 ~ 71547366 (-)
G1406760 NA other upstream 535158 71539958 ~ 71543469 (-)
G1407628 NA other upstream 1327006 72331806 ~ 72332715 (-)
G1407755 NA other upstream 1430629 72435429 ~ 72437847 (-)

Expression


Co-expression Network