trnat-agu-52



Basic Information


Item Value
gene id trnat-agu-52
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 71017096 ~ 71017169 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>trnat-agu-52
ggtgctgtggcttagttggttaaagtgcctgtctagtaaacaggagatcctgagttcaaatctcagcagtacct

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
trnat-agu-52 True 74 mRNA 0.46 1 71017096 71017169

Neighbor


gene id symbol gene type direction distance location
trnat-agu-51 NA coding downstream 1303 71015720 ~ 71015793 (-)
trnat-agu-50 NA coding downstream 2664 71014359 ~ 71014432 (-)
trnah-gug-37 NA coding downstream 3022 71014003 ~ 71014074 (-)
trnat-agu-49 NA coding downstream 4040 71012983 ~ 71013056 (-)
trnah-gug-36 NA coding downstream 4398 71012627 ~ 71012698 (-)
trnah-gug-38 NA coding upstream 947 71018116 ~ 71018187 (-)
trnat-agu-53 NA coding upstream 1303 71018472 ~ 71018545 (-)
trnah-gug-39 NA coding upstream 2323 71019492 ~ 71019563 (-)
trnat-agu-54 NA coding upstream 2679 71019848 ~ 71019921 (-)
trnat-agu-55 NA coding upstream 4040 71021209 ~ 71021282 (-)
G1406388 NA non-coding downstream 27566 70962973 ~ 70989530 (-)
G1406367 NA non-coding downstream 110880 70905290 ~ 70906216 (-)
G1406365 NA non-coding downstream 113023 70903817 ~ 70904073 (-)
G1406364 NA non-coding downstream 115191 70901634 ~ 70901905 (-)
G1406361 NA non-coding downstream 116092 70900631 ~ 70901004 (-)
G1406407 NA non-coding upstream 55938 71073107 ~ 71076732 (-)
G1406416 NA non-coding upstream 77810 71094979 ~ 71095352 (-)
G1406419 NA non-coding upstream 80830 71097999 ~ 71098250 (-)
G1406421 NA non-coding upstream 82076 71099245 ~ 71099572 (-)
G1406482 NA non-coding upstream 140161 71157330 ~ 71157705 (-)
G1406228 NA other downstream 274917 70735647 ~ 70742179 (-)
LOC110492660 LOC106566428 other downstream 795840 70216538 ~ 70221552 (-)
G1405917 NA other downstream 921555 70078657 ~ 70095541 (-)
G1405172 NA other downstream 1498983 69517755 ~ 69518113 (-)
G1405016 nsfl1c other downstream 1736737 69277827 ~ 69280359 (-)
G1406514 NA other upstream 243153 71260322 ~ 71260817 (-)
G1406752 NA other upstream 485310 71501118 ~ 71547366 (-)
G1406760 NA other upstream 522789 71539958 ~ 71543469 (-)
G1407628 NA other upstream 1314637 72331806 ~ 72332715 (-)
G1407755 NA other upstream 1418260 72435429 ~ 72437847 (-)

Expression



Co-expression Network