trnat-agu-58



Basic Information


Item Value
gene id trnat-agu-58
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 71026698 ~ 71026771 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>trnat-agu-58
ggtgctgtggcttagttggttaaagtgcctgtctagtaaacaggagatcctgagttcaaatctcagcagtacct

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
trnat-agu-58 True 74 mRNA 0.46 1 71026698 71026771

Neighbor


gene id symbol gene type direction distance location
trnat-agu-57 NA coding downstream 1288 71025337 ~ 71025410 (-)
trnah-gug-42 NA coding downstream 1646 71024981 ~ 71025052 (-)
trnat-agu-56 NA coding downstream 2664 71023961 ~ 71024034 (-)
trnah-gug-41 NA coding downstream 3022 71023605 ~ 71023676 (-)
trnah-gug-40 NA coding downstream 4398 71022229 ~ 71022300 (-)
trnah-gug-43 NA coding upstream 947 71027718 ~ 71027789 (-)
trnat-agu-59 NA coding upstream 1303 71028074 ~ 71028147 (-)
trnah-gug-44 NA coding upstream 2323 71029094 ~ 71029165 (-)
trnat-agu-60 NA coding upstream 2679 71029450 ~ 71029523 (-)
trnat-agu-61 NA coding upstream 4040 71030811 ~ 71030884 (-)
G1406388 NA non-coding downstream 37168 70962973 ~ 70989530 (-)
G1406367 NA non-coding downstream 120482 70905290 ~ 70906216 (-)
G1406365 NA non-coding downstream 122625 70903817 ~ 70904073 (-)
G1406364 NA non-coding downstream 124793 70901634 ~ 70901905 (-)
G1406361 NA non-coding downstream 125694 70900631 ~ 70901004 (-)
G1406407 NA non-coding upstream 46336 71073107 ~ 71076732 (-)
G1406416 NA non-coding upstream 68208 71094979 ~ 71095352 (-)
G1406419 NA non-coding upstream 71228 71097999 ~ 71098250 (-)
G1406421 NA non-coding upstream 72474 71099245 ~ 71099572 (-)
G1406482 NA non-coding upstream 130559 71157330 ~ 71157705 (-)
G1406228 NA other downstream 284519 70735647 ~ 70742179 (-)
LOC110492660 LOC106566428 other downstream 805442 70216538 ~ 70221552 (-)
G1405917 NA other downstream 931157 70078657 ~ 70095541 (-)
G1405172 NA other downstream 1508585 69517755 ~ 69518113 (-)
G1405016 nsfl1c other downstream 1746339 69277827 ~ 69280359 (-)
G1406514 NA other upstream 233551 71260322 ~ 71260817 (-)
G1406752 NA other upstream 475708 71501118 ~ 71547366 (-)
G1406760 NA other upstream 513187 71539958 ~ 71543469 (-)
G1407628 NA other upstream 1305035 72331806 ~ 72332715 (-)
G1407755 NA other upstream 1408658 72435429 ~ 72437847 (-)

Expression



Co-expression Network