trnat-agu-71


Basic Information

Item Value
gene id trnat-agu-71
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 71549506 ~ 71549579 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnat-agu-71
ggcgctgtggcttagttggttaaagcgcctgtctagtaaacaggagatcctgagttcgaatctcagcagagcct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnat-agu-71 True 74 mRNA 0.51 1 71549506 71549579

Neighbor

gene id symbol gene type direction distance location
LOC110517572 LOC106572960 coding upstream 48800 71418776 ~ 71500706 (+)
LOC110491185 LOC106566323 coding upstream 138493 71381355 ~ 71412264 (+)
LOC110491184 LOC106572946 coding upstream 187034 71286546 ~ 71362472 (+)
LOC118939583 NA coding upstream 351473 71196255 ~ 71198225 (+)
LOC118939582 LOC106566316 coding upstream 356458 71103181 ~ 71193739 (+)
trnat-agu-72 NA coding downstream 1017 71550596 ~ 71550669 (+)
trnat-agu-73 NA coding downstream 5370 71554949 ~ 71555022 (+)
trnat-agu-74 NA coding downstream 6460 71556039 ~ 71556112 (+)
trnat-agu-75 NA coding downstream 10825 71560249 ~ 71560716 (+)
trnat-agu-76 NA coding downstream 11915 71561494 ~ 71561567 (+)
G1406739 NA non-coding upstream 8127 71537927 ~ 71541379 (+)
G1406710 NA non-coding upstream 45912 71502570 ~ 71503594 (+)
G1406690 NA non-coding upstream 51374 71497144 ~ 71498132 (+)
G1406688 NA non-coding upstream 59884 71489265 ~ 71489622 (+)
G1406773 NA non-coding downstream 54292 71603871 ~ 71606427 (+)
G1406785 NA non-coding downstream 69968 71619547 ~ 71619958 (+)
G1406786 NA non-coding downstream 75020 71624599 ~ 71624824 (+)
G1406787 NA non-coding downstream 75292 71624871 ~ 71625136 (+)
G1406555 NA other upstream 133079 71413557 ~ 71416427 (+)
G1406510 NA other upstream 292529 71255979 ~ 71256977 (+)
G1406509 NA other upstream 297862 71251074 ~ 71251644 (+)
G1406508 NA other upstream 303483 71245573 ~ 71246023 (+)
G1406507 NA other upstream 333076 71214377 ~ 71216430 (+)
G1407190 NA other downstream 553807 72103386 ~ 72103841 (+)
G1407199 LOC106566391 other downstream 666734 72216313 ~ 72279555 (+)
ngrn ngrn other downstream 1092404 72641881 ~ 72646008 (+)
G1407509 NA other downstream 1216323 72765902 ~ 72769218 (+)
LOC110492598 LOC106566362 other downstream 1259151 72808730 ~ 72818165 (+)

Expression


Co-expression Network