trnat-agu-78


Basic Information

Item Value
gene id trnat-agu-78
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 71564764 ~ 71564837 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnat-agu-78
ggcgctgtggcttagttggttaaagcgcctgtctagtaaacaggagatcctgagttcgaatctcagcagagcct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnat-agu-78 True 74 mRNA 0.51 1 71564764 71564837

Neighbor

gene id symbol gene type direction distance location
trnat-agu-77 NA coding upstream 1017 71563674 ~ 71563747 (+)
trnat-agu-76 NA coding upstream 3197 71561494 ~ 71561567 (+)
trnat-agu-75 NA coding upstream 4287 71560249 ~ 71560716 (+)
trnat-agu-74 NA coding upstream 8652 71556039 ~ 71556112 (+)
trnat-agu-73 NA coding upstream 9742 71554949 ~ 71555022 (+)
trnat-agu-79 NA coding downstream 1017 71565854 ~ 71565927 (+)
trnat-agu-80 NA coding downstream 2107 71566944 ~ 71567017 (+)
trnat-agu-81 NA coding downstream 5377 71570214 ~ 71570287 (+)
trnat-agu-82 NA coding downstream 7557 71572394 ~ 71572467 (+)
trnat-agu-83 NA coding downstream 8647 71573484 ~ 71573557 (+)
G1406739 NA non-coding upstream 23385 71537927 ~ 71541379 (+)
G1406710 NA non-coding upstream 61170 71502570 ~ 71503594 (+)
G1406690 NA non-coding upstream 66632 71497144 ~ 71498132 (+)
G1406688 NA non-coding upstream 75142 71489265 ~ 71489622 (+)
G1406773 NA non-coding downstream 39034 71603871 ~ 71606427 (+)
G1406785 NA non-coding downstream 54710 71619547 ~ 71619958 (+)
G1406786 NA non-coding downstream 59762 71624599 ~ 71624824 (+)
G1406787 NA non-coding downstream 60034 71624871 ~ 71625136 (+)
G1406792 NA non-coding downstream 71804 71636641 ~ 71636860 (+)
G1406555 NA other upstream 148337 71413557 ~ 71416427 (+)
G1406510 NA other upstream 307787 71255979 ~ 71256977 (+)
G1406509 NA other upstream 313120 71251074 ~ 71251644 (+)
G1406508 NA other upstream 318741 71245573 ~ 71246023 (+)
G1406507 NA other upstream 348334 71214377 ~ 71216430 (+)
G1407190 NA other downstream 538549 72103386 ~ 72103841 (+)
G1407199 LOC106566391 other downstream 651476 72216313 ~ 72279555 (+)
ngrn ngrn other downstream 1077146 72641881 ~ 72646008 (+)
G1407509 NA other downstream 1201065 72765902 ~ 72769218 (+)
LOC110492598 LOC106566362 other downstream 1243893 72808730 ~ 72818165 (+)

Expression


Co-expression Network