trnat-agu-80


Basic Information

Item Value
gene id trnat-agu-80
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 71566944 ~ 71567017 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnat-agu-80
ggcgctgtggcttagttggttaaagcgcctgtctagtaaacaggagatcctgagttcgaatctcagcagagcct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnat-agu-80 True 74 mRNA 0.51 1 71566944 71567017

Neighbor

gene id symbol gene type direction distance location
trnat-agu-79 NA coding upstream 1017 71565854 ~ 71565927 (+)
trnat-agu-78 NA coding upstream 2107 71564764 ~ 71564837 (+)
trnat-agu-77 NA coding upstream 3197 71563674 ~ 71563747 (+)
trnat-agu-76 NA coding upstream 5377 71561494 ~ 71561567 (+)
trnat-agu-75 NA coding upstream 6467 71560249 ~ 71560716 (+)
trnat-agu-81 NA coding downstream 3197 71570214 ~ 71570287 (+)
trnat-agu-82 NA coding downstream 5377 71572394 ~ 71572467 (+)
trnat-agu-83 NA coding downstream 6467 71573484 ~ 71573557 (+)
trnat-agu-84 NA coding downstream 7557 71574574 ~ 71574647 (+)
trnat-agu-85 NA coding downstream 8647 71575664 ~ 71575737 (+)
G1406739 NA non-coding upstream 25565 71537927 ~ 71541379 (+)
G1406710 NA non-coding upstream 63350 71502570 ~ 71503594 (+)
G1406690 NA non-coding upstream 68812 71497144 ~ 71498132 (+)
G1406688 NA non-coding upstream 77322 71489265 ~ 71489622 (+)
G1406773 NA non-coding downstream 36854 71603871 ~ 71606427 (+)
G1406785 NA non-coding downstream 52530 71619547 ~ 71619958 (+)
G1406786 NA non-coding downstream 57582 71624599 ~ 71624824 (+)
G1406787 NA non-coding downstream 57854 71624871 ~ 71625136 (+)
G1406792 NA non-coding downstream 69624 71636641 ~ 71636860 (+)
G1406555 NA other upstream 150517 71413557 ~ 71416427 (+)
G1406510 NA other upstream 309967 71255979 ~ 71256977 (+)
G1406509 NA other upstream 315300 71251074 ~ 71251644 (+)
G1406508 NA other upstream 320921 71245573 ~ 71246023 (+)
G1406507 NA other upstream 350514 71214377 ~ 71216430 (+)
G1407190 NA other downstream 536369 72103386 ~ 72103841 (+)
G1407199 LOC106566391 other downstream 649296 72216313 ~ 72279555 (+)
ngrn ngrn other downstream 1074966 72641881 ~ 72646008 (+)
G1407509 NA other downstream 1198885 72765902 ~ 72769218 (+)
LOC110492598 LOC106566362 other downstream 1241713 72808730 ~ 72818165 (+)

Expression


Co-expression Network