trnat-agu-88


Basic Information

Item Value
gene id trnat-agu-88
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 71578934 ~ 71579007 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnat-agu-88
ggcgctgtggcttagttggttaaagcgcctgtctagtaaacaggagatcctgagttcgaatctcagcagagcct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnat-agu-88 True 74 mRNA 0.51 1 71578934 71579007

Neighbor

gene id symbol gene type direction distance location
trnat-agu-87 NA coding upstream 1017 71577844 ~ 71577917 (+)
trnat-agu-86 NA coding upstream 2107 71576754 ~ 71576827 (+)
trnat-agu-85 NA coding upstream 3197 71575664 ~ 71575737 (+)
trnat-agu-84 NA coding upstream 4287 71574574 ~ 71574647 (+)
trnat-agu-83 NA coding upstream 5377 71573484 ~ 71573557 (+)
trnat-agu-89 NA coding downstream 1017 71580024 ~ 71580097 (+)
trnat-agu-90 NA coding downstream 2783 71581790 ~ 71581863 (+)
trnat-agu-91 NA coding downstream 7136 71586143 ~ 71586216 (+)
trnat-agu-92 NA coding downstream 9631 71588638 ~ 71588711 (+)
trnat-agu-93 NA coding downstream 13892 71592899 ~ 71592972 (+)
trnat-agu-75 NA non-coding upstream 18218 71560249 ~ 71560716 (+)
G1406739 NA non-coding upstream 37555 71537927 ~ 71541379 (+)
G1406710 NA non-coding upstream 75340 71502570 ~ 71503594 (+)
G1406690 NA non-coding upstream 80802 71497144 ~ 71498132 (+)
G1406688 NA non-coding upstream 89312 71489265 ~ 71489622 (+)
G1406773 NA non-coding downstream 24864 71603871 ~ 71606427 (+)
G1406785 NA non-coding downstream 40540 71619547 ~ 71619958 (+)
G1406786 NA non-coding downstream 45592 71624599 ~ 71624824 (+)
G1406787 NA non-coding downstream 45864 71624871 ~ 71625136 (+)
G1406792 NA non-coding downstream 57634 71636641 ~ 71636860 (+)
G1406555 NA other upstream 162507 71413557 ~ 71416427 (+)
G1406510 NA other upstream 321957 71255979 ~ 71256977 (+)
G1406509 NA other upstream 327290 71251074 ~ 71251644 (+)
G1406508 NA other upstream 332911 71245573 ~ 71246023 (+)
G1406507 NA other upstream 362504 71214377 ~ 71216430 (+)
G1407190 NA other downstream 524379 72103386 ~ 72103841 (+)
G1407199 LOC106566391 other downstream 637306 72216313 ~ 72279555 (+)
ngrn ngrn other downstream 1062976 72641881 ~ 72646008 (+)
G1407509 NA other downstream 1186895 72765902 ~ 72769218 (+)
LOC110492598 LOC106566362 other downstream 1229723 72808730 ~ 72818165 (+)

Expression


Co-expression Network