LOC118939593


Basic Information

Item Value
gene id LOC118939593
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 74183180 ~ 74197780 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005036626.1
ttgttttcctgttgtcacgatcgtcgtatgaagcggaccaaaatgcagcgtgAAAGAGCGAGCGCTGATCGGGTCACATGCATGTGGAAGAAGTGCTGCTTGACGTCCATAAATAGCCGATGTGACGACTGGACAGGCATCACATTTTCAGGTGCAAGATACCAGACCACTCTGAGATCCACAGTACTGTCAGCAGCAggcagtaccagtagtagtagtagtagtagtagtattcggaccaacactttgcatttCTTCAGAAAGACTCAGAAGACATCGTTTGAGGCCGCAACAATGAAGTTCACCATGATTTTGCTGGGTTTGCTGCTGTCCTGTCTAGTCGTTCTGTGTAGAAGTTCTCAATCCCACTGCTGTCCTGCCAATGAAAGGTGCACAATTGTGACTCTACAACACAGACTGACGCAACCGAAGGTTCCCCTCCATGCCGCTAAGATTGAGGAAACCTCTCTGGCTCCCTGGAATTACACATATAACAAGAACGACAACAGGGTCCCACAAATCATCAGGAATGCCACCTGCTCAGATTGTATGGTCAAAGGACTGAAGGCAGTGCCGATTCAATACGAGATGAACGTTTTTCACAGGAAAAAATGTGGAAGTACATTTGTTATTTGTATGTGTCCTTGCACGGTTAATTTAGGCTGCACCTGTGTGAAAGAGAAGAAGTGTCACAGCATTTCTGCTAGATGTCTTCCTGAGCAGAGGAGTGGATAGGCCTACTGTGTAGTGGACATCCCCCAaaagaaccctattccctacatagtgcactactttagaccagagccctatggcacagtattccctatatagtgcactactttagatcagggccctatggcaccctattccctatatatagtgcactactttagaccagataaCCAATTACTGCTGTAATATGTGCTGTAGTGTGGATGCTTCCAGAGATCTATTACTATTATCTGTTATTACTCTAGATTTACTCTACCTCCTTCCTTGACCTGTGATATGTGATTgtcttacctaccttagttgaatgcaccgACAGTAGGTGGCTCTgtataagagagtctgctaaatgactcactactgtaagtggctctggataagagagtctgctaaatgactcactactgtaagtctctctggataagagagtctgctaaattattcactactgtagtgtctctggattaGAGAGTCTGCGAAATgattcactactgtaagtctctctggataagagagtctgctaaatgactcactactgtaagtctctctggataagagagtctgctaaattattcactactgtagtgtctctggattaGAGAGTCTGCGAAATGATTCACTACTGTAagtatctctggataagagagtctgctaaatgacccactactgtaagtctctctggataagagagtctgctaaatgacccactactgtagtggatcagagagtctgctaaa

Function

NR:

description
PREDICTED: interleukin-17A-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005036626.1 True 1466 mRNA 0.44 4 74183180 74197780

Neighbor

gene id symbol gene type direction distance location
rps21 LOC106572905 coding downstream 541 74172873 ~ 74182639 (-)
lama5 lama5 coding downstream 27282 73879188 ~ 74155898 (-)
LOC110492453 LOC106566293 coding downstream 315602 73832868 ~ 73867578 (-)
LOC110492451 LOC106566294 coding downstream 360944 73782999 ~ 73822236 (-)
ppdpfb LOC106566296 coding downstream 405748 73769856 ~ 73777432 (-)
LOC118939594 NA coding upstream 16748 74214528 ~ 74217266 (-)
LOC110510377 cables2 coding upstream 19540 74217320 ~ 74331109 (-)
ccm2l ccm2l coding upstream 141475 74339255 ~ 74374071 (-)
LOC110518683 LOC105027955 coding upstream 190160 74387940 ~ 74450972 (-)
LOC110512152 LOC106566317 coding upstream 460018 74657798 ~ 74757404 (-)
G1409035 NA non-coding downstream 11888 74170851 ~ 74171292 (-)
G1409033 NA non-coding downstream 13960 74168857 ~ 74169220 (-)
G1409032 NA non-coding downstream 14380 74168505 ~ 74168800 (-)
G1409028 NA non-coding downstream 20818 74161576 ~ 74162362 (-)
G1409027 NA non-coding downstream 21724 74161223 ~ 74161456 (-)
G1409053 NA non-coding upstream 4336 74202116 ~ 74202488 (-)
G1409148 NA non-coding upstream 33124 74230904 ~ 74233373 (-)
G1409150 NA non-coding upstream 55558 74253338 ~ 74254210 (-)
G1409153 NA non-coding upstream 61029 74258809 ~ 74259408 (-)
G1409166 NA non-coding upstream 101762 74299542 ~ 74300391 (-)
G1408615 NA other downstream 950226 73230812 ~ 73232954 (-)
G1407755 NA other downstream 1745333 72435429 ~ 72437847 (-)
G1407628 NA other downstream 1850465 72331806 ~ 72332715 (-)
G1409407 NA other upstream 538653 74736433 ~ 74739189 (-)
G1409430 LOC106566333 other upstream 647324 74845104 ~ 74847937 (-)
G1409847 NA other upstream 1171110 75368890 ~ 75369623 (-)
G1409928 NA other upstream 1237274 75435054 ~ 75435540 (-)
G1410190 NA other upstream 1557998 75755742 ~ 75756479 (-)

Expression


Co-expression Network