irak1 (LOC106566344)


Basic Information

Item Value
gene id irak1
gene name LOC106566344
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 74986625 ~ 75015379 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036947807.1
AAGTTCTGCTTGCTGGAGATGGCGAAGTTTCTAGGCATATTTAAAGCAGGGGAATAACTTATTGAATAAccgatttatatatatatatatatttatatatcagCGTGATCGTTCTTACCGTAGTGAATTTGAAACATCAGAACAAAAATGTTACAGCTAGCTTGCTAGCAAGGTTTTTAAAAGATGTCGTCCTGGGATATCGGAAAGGTCTACTTGTACAAGTTACCACCAGTTGTGCTGTGCGACTTCTCCCTTGTTATGGACAGTATCTCCGATGTGGACTGGGACAGATTCGCGTCTCATGTGTTGACTGACCAGACTGACAGGCGTCTggccgagaggagagagagacggacagactgGGTGATGAATCACTGGGCACAAAGGAATGGAACAGTAGGAGAACTACTGAACGTACTGGACAAGCTGCAGCTGTTAAGAGCTAGAGATATCATCTTGAACTGGAAGCCCAGTGGACTACGGCCCTCTTCCACTCCACTTGCTGCTCCGTCGCAGGTTAAACTGGAGCCTCTTGTtcctccatctcatctcttcAACCCACCTCCTAAAGTCCATCCTACCAACACTCTGGCCACTAAGGCGTACTCTCCACCTGGACTGAGGTCTCTGCCCAAACCTGGCCCTCCACCCTCAGGGCTGAAATCACAGGACCACAGAGGGGCGTTTGTAGACCAACAGTGGTCCATCTCCAGAGGTCCCCTGCTGTCCAGTGCCATGTGTTGGCCGTTTGAGGAAGtccagagaggaacagaggactTCTCCCATGCCAAgcagataggagagggggggtttGGACATGTGTACCGGGCTACCATGAGGAGCACCGACTTCGCTGTCAAGAAACTGAAGGAGAACTCTCCACTAGACTGGAGCGTAGTGAAGGAGAGCTTCAAGACCGAGGTGGAGAAGCTATCACAATACAGACATCCCAATATTGTAGACTTTGTGGGCTACTGTGTTGGACAAGGAACCTACTGTCTGCTCTATGTCTTCATGCCCAACGGTTCTCTGGAAGACCAGCTGCACAACCAGGCCAGTGCTGCCCTCTTCTGGCCACAGCGTGTCAGTGTGTTGCTGGGCACAGCCAGAGCCATTcagttcctccactcctcctctccgcAGCTCATACATGGAGACATCAAGAGCTCTAACATCCTACTAGACGAGCACCTGGAGCCTAAGCTGGGGGACTTTGGCCTGGCCCGGTTCTGCTGTAGCCCCAGCAGTAGGTCCGCTGGTAGAACCACCACGGTAGCCTATACCAAGACAGTGAGGGGAACACAGGCGTACTTACCTGACGAATACCTCAAAACAGGCGCGTTGGGAGTAGCCATTGACATCTTCAGCTTTGGAGTGGTGCTGCTGGAGGCTCTGACTGGTCGTAGAGCTTTAGAAGTGGACCACAGCCAATCCAAAGCTGTCTACCTGAAAGACCTGGTGAAGGAGGCTGAGGACGACGCAGGTCATCAGGTCAGAGGGAGGTCAAAGAGGACTTCAGAGAAAGTGACCCAGGAACAGTCTAGTATTCCTCCAGCCGCTACACATATCTGGCAGAAGCACCTGGACCCCAGACTGATGGTGACAGGGATGGGAGGCTCTCTTTCTAGCTCATCCAGGGTTTGTACGGCAGGTCCGGGCTCCTCTTCTCCGGCCCCACACGGCTCCCTGGATCTGACGACTCTGGCCTGTCGCTGTCTGGAGGCCCGGGGGAAGAAAAGGCCCCCCATGACCGAGGTGTTCCAGGCGCTTCAAGACATCCATACCAGTTTGAAGGCCTCAGACAAAGCcgtatcctcctcttcttctccttctcagcAGTCCTTCCCCAAACCTCCTCAATCATCCATAGACTCATGTATAGACTGCCTAACAGACGTTCTGTCAAAAGTAGGTCCACTGGAAGACACGTACCACTGCCCTCCACACCCCTACTCAATCTCGCCTCACCCGTCCTcggtcctccctccttcctcctcctcgtcctcctccttcCTTGGTCCATGTGAATCAGATGAGAGCCAAGGTTATTCCCAGTACTGTGCTCCTCCTTCTCGGCTCCCCCATAGTGACACCCGATCAGACCCCCAGACCTCCATGCCATGTGGTTGGTCTTCACCAGCCAGACAGTTACGCTCCAGGTCCCCGTGCTCAGCGTCAGgctTGCCCTGCCATGGACTAGTTGTAAATACGTGCGAAGAGCGTTTCCTTCACAAGATGGCGCTCTGTGACGAAGGCAGAATACAGACCGGCCAGCTTTTTTTCCTCAGATATTTATTTATGCTGAGATGAACCCACAATGCCGAGGACCAGAAGAGAGTGATGAGCTTGATTATCTTTCCAGTGAGGCCAGTGAGAGTCAAGCCAACACACCCAGACAGACCAACGCTCACAACTAACAACCCAGCCTACCATTACACACTGCAGTACCTAAACAAACTAAGCCATGTGGGTGCGATCTGCGTCTCATACATTGGCCAACAGTCAATATTGGCTGTTATGCAAGTTCAGTTTGGGAAATGCAAAGCAAATGTTGacttgacaaaaaaaaagcaGGATTGGAGTATGttccatttttattttaaaaaactgAAGCATTGCGGTTTTGATATCGTGAAATGTAATCAAATCCAATCATTTCTTTCACACATCACTAGTTATGGTTACAATTTGTACAATGTATCTTTTAGATAATTCAGACAACTGTATGATTTGTATTTGTACAATATGAATGTCAAGGTTTTCATTAAATaaacttgaactggactgac
>XM_036947808.1
AAGTTCTGCTTGCTGGAGATGGCGAAGTTTCTAGGCATATTTAAAGCAGGGGAATAACTTATTGAATAAccgatttatatatatatatatatttatatatcagCGTGATCGTTCTTACCGTAGTGAATTTGAAACATCAGAACAAAAATGTTACAGCTAGCTTGCTAGCAAGGTTTTTAAAAGATGTCGTCCTGGGATATCGGAAAGGTCTACTTGTACAAGTTACCACCAGTTGTGCTGTGCGACTTCTCCCTTGTTATGGACAGTATCTCCGATGTGGACTGGGACAGATTCGCGTCTCATGTGTTGACTGACCAGACTGACAGGCGTCTggccgagaggagagagagacggacagactgGGTGATGAATCACTGGGCACAAAGGAATGGAACAGTAGGAGAACTACTGAACGTACTGGACAAGCTGCAGCTGTTAAGAGCTAGAGATATCATCTTGAACTGGAAGCCCAGTGGACTACGGCCCTCTTCCACTCCACTTGCTGCTCCGTCGCAGGTTAAACTGGAGCCTCTTGTtcctccatctcatctcttcAACCCACCTCCTAAAGTCCATCCTACCAACACTCTGGCCACTAAGGCGTACTCTCCACCTGGACTGAGGTCTCTGCCCAAACCTGGCCCTCCACCCTCAGGGCTGAAATCACAGGACCACAGAGGGGCGTTTGTAGACCAACAGTGGTCCATCTCCAGAGGTCCCCTGCTGTCCAGTGCCATGTGTTGGCCGTTTGAGGAAGtccagagaggaacagaggactTCTCCCATGCCAAgcagataggagagggggggtttGGACATGTGTACCGGGCTACCATGAGGAGCACCGACTTCGCTGTCAAGAAACTGAAGGAGAACTCTCCACTAGACTGGAGCGTAGTGAAGGAGAGCTTCAAGACCGAGGTGGAGAAGCTATCACAATACAGACATCCCAATATTGTAGACTTTGTGGGCTACTGTGTTGGACAAGGAACCTACTGTCTGCTCTATGTCTTCATGCCCAACGGTTCTCTGGAAGACCAGCTGCACAACCAGGCCAGTGCTGCCCTCTTCTGGCCACAGCGTGTCAGTGTGTTGCTGGGCACAGCCAGAGCCATTcagttcctccactcctcctctccgcAGCTCATACATGGAGACATCAAGAGCTCTAACATCCTACTAGACGAGCACCTGGAGCCTAAGCTGGGGGACTTTGGCCTGGCCCGGTTCTGCTGTAGCCCCAGCAGTAGGTCCGCTGGTAGAACCACCACGGTAGCCTATACCAAGACAGTGAGGGGAACACAGGCGTACTTACCTGACGAATACCTCAAAACAGGCGCGTTGGGAGTAGCCATTGACATCTTCAGCTTTGGAGTGGTGCTGCTGGAGGCTCTGACTGGTCGTAGAGCTTTAGAAGTGGACCACAGCCAATCCAAAGCTGTCTACCTGAAAGACCTGGTGAAGGAGGCTGAGGACGACGCAGGTCATCAGGTCAGAGGGAGGTCAAAGAGGACTTCAGAGAAAGTGACCCAGGAACAGTCTAGTATTCCTCCAGCCGCTACACATATCTGGCAGAAGCACCTGGACCCCAGACTGATGGTGACAGGGATGGGAGGCTCTCTTTCTAGCTCATCCAGGGTTTGTACGGCAGGTCCGGGCTCCTCTTCTCCGGCCCCACACGGCTCCCTGGATCTGACGACTCTGGCCTGTCGCTGTCTGGAGGCCCGGGGGAAGAAAAGGCCCCCCATGACCGAGGTGTTCCAGGCGCTTCAAGACATCCATACCAGTTTGAAGGCCTCAGACAAAGCcgtatcctcctcttcttctccttctcagcAGTCCTTCCCCAAACCTCCTCAATCATCCATAGACTCATGTATAGACTGCCTAACAGACGTTCTGTCAAAAGTAGGTCCACTGGAAGACACGTACCACTGCCCTCCACACCCCTACTCAATCTCGCCTCACCCGTCCTcggtcctccctccttcctcctcctcgtcctcctccttcCTTGGTCCATGTGAATCAGATGAGAGCCAAGGTTATTCCCAGTACTGTGCTCCTCCTTCTCGGCTCCCCCATAGTGACACCCGATCAGACCCCCAGACCTCCATGCCATGTGGTTGGTCTTCACCAGCCAGACAGTTACGCTCCAGGTCCCCGTGCTCAGCGTCAGATGCTGAGATGAACCCACAATGCCGAGGACCAGAAGAGAGTGATGAGCTTGATTATCTTTCCAGTGAGGCCAGTGAGAGTCAAGCCAACACACCCAGACAGACCAACGCTCACAACTAACAACCCAGCCTACCATTACACACTGCAGTACCTAAACAAACTAAGCCATGTGGGTGCGATCTGCGTCTCATACATTGGCCAACAGTCAATATTGGCTGTTATGCAAGTTCAGTTTGGGAAATGCAAAGCAAATGTTGacttgacaaaaaaaaagcaGGATTGGAGTATGttccatttttattttaaaaaactgAAGCATTGCGGTTTTGATATCGTGAAATGTAATCAAATCCAATCATTTCTTTCACACATCACTAGTTATGGTTACAATTTGTACAATGTATCTTTTAGATAATTCAGACAACTGTATGATTTGTATTTGTACAATATGAATGTCAAGGTTTTCATTAAATaaacttgaactggactgac
>XM_036947809.1
AAGTTCTGCTTGCTGGAGATGGCGAAGTTTCTAGGCATATTTAAAGCAGGGGAATAACTTATTGAATAAccgatttatatatatatatatatttatatatcagCGTGATCGTTCTTACCGTAGTGAATTTGAAACATCAGAACAAAAATGTTACAGCTAGCTTGCTAGCAAGGTTTTTAAAAGATGTCGTCCTGGGATATCGGAAAGGTCTACTTGTACAAGTTACCACCAGTTGTGCTGTGCGACTTCTCCCTTGTTATGGACAGTATCTCCGATGTGGACTGGGACAGATTCGCGTCTCATGTGTTGACTGACCAGACTGACAGGCGTCTggccgagaggagagagagacggacagactgGGTGATGAATCACTGGGCACAAAGGAATGGAACAGTAGGAGAACTACTGAACGTACTGGACAAGCTGCAGCTGTTAAGAGCTAGAGATATCATCTTGAACTGGAAGCCCAGTGGACTACGGCCCTCTTCCACTCCACTTGCTGCTCCGTCGCAGGTTAAACTGGAGCCTCTTGTtcctccatctcatctcttcAACCCACCTCCTAAAGTCCATCCTACCAACACTCTGGCCACTAAGGCGTACTCTCCACCTGGACTGAGGTCTCTGCCCAAACCTGGCCCTCCACCCTCAGGGCTGAAATCACAGGACCACAGAGGGGCGTTTGTAGACCAACAGAACTCTCCACTAGACTGGAGCGTAGTGAAGGAGAGCTTCAAGACCGAGGTGGAGAAGCTATCACAATACAGACATCCCAATATTGTAGACTTTGTGGGCTACTGTGTTGGACAAGGAACCTACTGTCTGCTCTATGTCTTCATGCCCAACGGTTCTCTGGAAGACCAGCTGCACAACCAGGCCAGTGCTGCCCTCTTCTGGCCACAGCGTGTCAGTGTGTTGCTGGGCACAGCCAGAGCCATTcagttcctccactcctcctctccgcAGCTCATACATGGAGACATCAAGAGCTCTAACATCCTACTAGACGAGCACCTGGAGCCTAAGCTGGGGGACTTTGGCCTGGCCCGGTTCTGCTGTAGCCCCAGCAGTAGGTCCGCTGGTAGAACCACCACGGTAGCCTATACCAAGACAGTGAGGGGAACACAGGCGTACTTACCTGACGAATACCTCAAAACAGGCGCGTTGGGAGTAGCCATTGACATCTTCAGCTTTGGAGTGGTGCTGCTGGAGGCTCTGACTGGTCGTAGAGCTTTAGAAGTGGACCACAGCCAATCCAAAGCTGTCTACCTGAAAGACCTGGTGAAGGAGGCTGAGGACGACGCAGGTCATCAGGTCAGAGGGAGGTCAAAGAGGACTTCAGAGAAAGTGACCCAGGAACAGTCTAGTATTCCTCCAGCCGCTACACATATCTGGCAGAAGCACCTGGACCCCAGACTGATGGTGACAGGGATGGGAGGCTCTCTTTCTAGCTCATCCAGGGTTTGTACGGCAGGTCCGGGCTCCTCTTCTCCGGCCCCACACGGCTCCCTGGATCTGACGACTCTGGCCTGTCGCTGTCTGGAGGCCCGGGGGAAGAAAAGGCCCCCCATGACCGAGGTGTTCCAGGCGCTTCAAGACATCCATACCAGTTTGAAGGCCTCAGACAAAGCcgtatcctcctcttcttctccttctcagcAGTCCTTCCCCAAACCTCCTCAATCATCCATAGACTCATGTATAGACTGCCTAACAGACGTTCTGTCAAAAGTAGGTCCACTGGAAGACACGTACCACTGCCCTCCACACCCCTACTCAATCTCGCCTCACCCGTCCTcggtcctccctccttcctcctcctcgtcctcctccttcCTTGGTCCATGTGAATCAGATGAGAGCCAAGGTTATTCCCAGTACTGTGCTCCTCCTTCTCGGCTCCCCCATAGTGACACCCGATCAGACCCCCAGACCTCCATGCCATGTGGTTGGTCTTCACCAGCCAGACAGTTACGCTCCAGGTCCCCGTGCTCAGCGTCAGgctTGCCCTGCCATGGACTAGTTGTAAATACGTGCGAAGAGCGTTTCCTTCACAAGATGGCGCTCTGTGACGAAGGCAGAATACAGACCGGCCAGCTTTTTTTCCTCAGATATTTATTTATGCTGAGATGAACCCACAATGCCGAGGACCAGAAGAGAGTGATGAGCTTGATTATCTTTCCAGTGAGGCCAGTGAGAGTCAAGCCAACACACCCAGACAGACCAACGCTCACAACTAACAACCCAGCCTACCATTACACACTGCAGTACCTAAACAAACTAAGCCATGTGGGTGCGATCTGCGTCTCATACATTGGCCAACAGTCAATATTGGCTGTTATGCAAGTTCAGTTTGGGAAATGCAAAGCAAATGTTGacttgacaaaaaaaaagcaGGATTGGAGTATGttccatttttattttaaaaaactgAAGCATTGCGGTTTTGATATCGTGAAATGTAATCAAATCCAATCATTTCTTTCACACATCACTAGTTATGGTTACAATTTGTACAATGTATCTTTTAGATAATTCAGACAACTGTATGATTTGTATTTGTACAATATGAATGTCAAGGTTTTCATTAAATaaacttgaactggactgac

Function

NR:

description
interleukin-1 receptor-associated kinase 1-like

GO:

id name namespace
GO:0016772 transferase activity, transferring phosphorus-containing groups molecular_function

KEGG:

id description
K04730 IRAK1; interleukin-1 receptor-associated kinase 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036947807.1 False 2789 mRNA 0.50 14 74986625 75015379
XM_036947808.1 False 2670 mRNA 0.50 13 74986625 75015379
XM_036947809.1 True 2615 mRNA 0.50 13 74986625 75015379

Neighbor

gene id symbol gene type direction distance location
LOC110492703 LOC106566343 coding downstream 1790 74922068 ~ 74984835 (-)
LOC118939467 NA coding downstream 80827 74900487 ~ 74905798 (-)
LOC110512152 LOC106566317 coding downstream 229221 74657798 ~ 74757404 (-)
LOC110518683 LOC105027955 coding downstream 535653 74387940 ~ 74450972 (-)
ccm2l ccm2l coding downstream 612554 74339255 ~ 74374071 (-)
LOC110491183 LOC106566345 coding upstream 14228 75029607 ~ 75046973 (-)
LOC118939468 NA coding upstream 356241 75371620 ~ 75372905 (-)
LOC110492917 LOC106566358 coding upstream 584655 75600034 ~ 75615122 (-)
LOC110492699 tcea2 coding upstream 1088830 76104209 ~ 76119590 (-)
LOC110492709 LOC106566328 coding upstream 1545878 76561257 ~ 76642094 (-)
G1409768 NA non-coding downstream 12691 74971324 ~ 74973934 (-)
G1409769 NA non-coding downstream 13059 74973095 ~ 74973566 (-)
G1409742 NA non-coding downstream 82654 74903746 ~ 74903971 (-)
G1409752 NA non-coding upstream 2234 75017613 ~ 75024741 (-)
G1409794 NA non-coding upstream 46809 75062188 ~ 75062682 (-)
G1409806 NA non-coding upstream 73748 75089127 ~ 75090666 (-)
G1409816 NA non-coding upstream 100354 75115733 ~ 75115957 (-)
G1409823 NA non-coding upstream 120756 75136135 ~ 75136489 (-)
G1409430 LOC106566333 other downstream 138688 74845104 ~ 74847937 (-)
G1409407 NA other downstream 247436 74736433 ~ 74739189 (-)
G1409044 NA other downstream 790674 74195525 ~ 74195951 (-)
rps21 LOC106572905 other downstream 804045 74172873 ~ 74182639 (-)
ppdpfb LOC106566296 other downstream 1209268 73769856 ~ 73777432 (-)
G1409847 NA other upstream 353511 75368890 ~ 75369623 (-)
G1409928 NA other upstream 419675 75435054 ~ 75435540 (-)
G1410190 NA other upstream 740399 75755742 ~ 75756479 (-)
G1410213 NA other upstream 848450 75807474 ~ 75864456 (-)
G1410288 NA other upstream 925328 75940707 ~ 75941802 (-)

Expression


Co-expression Network