Gene
RNA
| Item | Value |
|---|---|
| gene id | flna |
| gene name | LOC100380643 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 77955599 ~ 78024979 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036947852.1 | False | 9037 | mRNA | 0.54 | 49 | 77955599 | 78024975 |
| XM_036947847.1 | False | 9126 | mRNA | 0.54 | 49 | 77955599 | 78024977 |
| XM_036947849.1 | False | 9102 | mRNA | 0.54 | 48 | 77955599 | 78024977 |
| XM_036947850.1 | False | 9051 | mRNA | 0.54 | 48 | 77955599 | 78024977 |
| XM_036947851.1 | True | 7903 | mRNA | 0.56 | 47 | 77956638 | 78024979 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ikbkg | LOC106572992 | coding | downstream | 372941 | 77493860 ~ 77582658 (-) |
| LOC110491186 | LOC106572997 | coding | downstream | 810801 | 77138689 ~ 77144798 (-) |
| LOC110492706 | LOC106566322 | coding | downstream | 850882 | 77102080 ~ 77104717 (-) |
| LOC118939598 | LOC106572974 | coding | downstream | 958579 | 76807151 ~ 76997020 (-) |
| LOC110514470 | uba1 | coding | downstream | 1180835 | 76705789 ~ 76774764 (-) |
| LOC118939482 | NA | coding | upstream | 3228 | 78028207 ~ 78029944 (-) |
| dnase1l1 | LOC106566338 | coding | upstream | 46640 | 78071619 ~ 78096380 (-) |
| LOC110512774 | LOC106566310 | coding | upstream | 79601 | 78104580 ~ 78137424 (-) |
| ndnl2 | LOC106593143 | coding | upstream | 142986 | 78167965 ~ 78193667 (-) |
| LOC110492727 | NA | coding | upstream | 176906 | 78201885 ~ 78203768 (-) |
| G1411819 | NA | non-coding | downstream | 3094 | 77951227 ~ 77952505 (-) |
| G1411817 | NA | non-coding | downstream | 5933 | 77949451 ~ 77949666 (-) |
| G1411813 | NA | non-coding | downstream | 9090 | 77945584 ~ 77946509 (-) |
| G1411812 | NA | non-coding | downstream | 10666 | 77944245 ~ 77944933 (-) |
| G1411811 | NA | non-coding | downstream | 11620 | 77943748 ~ 77943979 (-) |
| G1411861 | NA | non-coding | upstream | 20335 | 78045314 ~ 78045644 (-) |
| G1411850 | LOC106592737 | non-coding | upstream | 39539 | 78064518 ~ 78065283 (-) |
| G1411845 | rl10 | non-coding | upstream | 41058 | 78056967 ~ 78067510 (-) |
| G1411867 | NA | non-coding | upstream | 42589 | 78067568 ~ 78067842 (-) |
| G1411876 | NA | non-coding | upstream | 91767 | 78116746 ~ 78120205 (-) |
| G1411366 | NA | other | downstream | 604374 | 77349553 ~ 77351225 (-) |
| G1411281 | NA | other | downstream | 789776 | 77165458 ~ 77165823 (-) |
| G1410911 | NA | other | downstream | 983480 | 76961470 ~ 76972119 (-) |
| G1410776 | LOC106591762 | other | downstream | 1158488 | 76795583 ~ 76797111 (-) |
| G1410773 | NA | other | downstream | 1160546 | 76792420 ~ 76795053 (-) |
| G1411862 | NA | other | upstream | 25287 | 78050266 ~ 78053138 (-) |
| G1412091 | NA | other | upstream | 291338 | 78316317 ~ 78318998 (-) |
| G1412203 | LOC100136012 | other | upstream | 479312 | 78504291 ~ 78511632 (-) |
