LOC110492722 (LOC106566331)


Basic Information

Item Value
gene id LOC110492722
gene name LOC106566331
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 78324077 ~ 78381586 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036947863.1
ttcaaaatggagattgtCGAGAAAAAAAAAGATCACAGACGCTATagtggcacagatacaaagaggAGTCCTCTATTTATGTCTATGGCTCGACTCTGCTGTAGTTCAGTTGGCAAGTGCAGCCAGGACACACGGACCAGTTCCTGGACAAGAGAGACTTGACTGAGTTTTATGgtccAGAGTGATTCCTGATGGTAGCTACAGACTGAGAAGGAAGGACTGActgactataactacaacctCTACCAGTGTCTTAACCAGCCACCTCAAACGGGTTTGTGTGACCTACCCTTCAGTGTGGGGGTGTTAGGACTATCCCTCTGACAGCATGGCCCCAGCGGTGGGCGGTCCGGTGGGCTACACTCCTCCAGaggggggctggggctgggcggTGGTGGTGGGAGCCTTCATCTCTATTGGCTTCTCCTATGCCTTCCCCAAGTCCATCACTGTCTTCTTCAAGGAGCTGGAGGCCACCTTTGACGCTACTCCCTCACAGGTCTCATGGATCTCCTCTATCATGCTGGCCTGCATGTacggtggaggACCAATTAGCAGTATTCTGGTGAACCGCTATGGCAGTCGACCAATCATGATGCTAGGGGGCTGTCTGTCAGGAAGTGGTTTGATAGCAGCTTCCTTCTGCAACACTGTGCAACAACTCTACTTCTGTGTCGGAGTTATTGGAGgtCTGGGTCTAGCGTTCAACCTGAATCCGGCGTTGACTATGATTGGTAAATACTTCTATAAGCGTCGTCCTATAGCCAATGGCATTGCCATGGCGGGCAGCCCAGTCTTCCTGTCCACGCTGGCTCCTCTTAACTCCTGGTTCTTTGACCAGTTTGGCTGGAGGGGCTCCTTCCTCATCCTAGGTGGTCTACTGCTCAACTGCTGTGTAGCTGGGTCCTTGATGAGACCCATTGGACCCAAACCTGCCGACCCCCAACTGTCGGAGAACGGGGCGGTGAAGAAGGCGGAGTCTAATCTGACGGTGATGCAGCGTGTCAATGCCGTGATTGACCTGACGCTGTTTAAACACCGCGGCTTCCTGCTGTATCTCCTTGGCAACGTCATCATGTTCTTTGGCCTGTTCTCTCCCCTAGTCTTCCTCTCCAACTACGCTAAGAGTAAGGACATCAGTAAAGAGAAGGCTGCTCTGCTTCTCTCCATCCTCGCCTTTGTTGACATGTTCGCCCGTCCTTCTATGGGGCTGTTAGCCAACACCCGCTGGGTCCGACCCAGGATACAGTACTTCTTCGCTGCATCCGTGCTCTATAACGGGGTGTGTCACGTCTTGGCGCCGCTGTCCGTGGACTATGTAGGCTTCGTGGTGTATGCTGTGTTCTTTGGGTTTGCGTTCGGCTGGCTGTCAGCAGTTCTGTTTGAGACTCTGATGGACCTGGTCGGGGCCCAGAGGTTCTCCTCAGCCGTCGGACTCGTCACCATCGTGGAGTGTGGACCGGTACTGCTGGGACCGCCACTACTCaGTCGTTTCTATGACTTCTATGGTGACTACCAGTGGACCTACCTGTGTTGTGGTATCATCCTCATCATCTCCTCAGTTTTCCTCTTCGTAGGGATGGGCATCAACTACAagctgttggagagagagaaggaggaggaggagaggagagagacggagcggCCCAAGGAGGAGTGCACAGCCATgctggggggagagaaggaggagaggagagagacagagcggccCAAGGAGGAGTGCACAGCCAtgctggagggagagaaggaaaggggggaGGAGAGTAGTGAGGCCACACCCATGACGGATGTTTCTAAGATGGATGAAGATATTGTTTAGCAGGGTAGGCAACTAAATGCAGTCGAGGGGCCGAAACAACATAATTAGAATAATTTGAACACTGTAAATTaccacaactaagcccaaaaagACATGATcaatttcataccttgattacattgagaataTTTGGGAGCACATTTCCTAAATTTAAATAATTTTTAGTTGAATTCCTGTATcccccttattattattattattattattattattattattattattattactactactactacttcggGGGGCCCAAAAAATCACTTTCGGGCTGGTTTTGGCCCGTTGGCCTCCTGTTGCCAACCCCTGCTGTATAGAGACTGACCTGATCTGGACACACACCCTCTGGTTTAGGTACCTTTGGTAAACTGAGCCGAGTCCTCTACAGTAGACGAGCTATAACACAGAGGACTACTGTCTCTGAGCTCACATATACAACATCCAGTATCTATCCCAGCTCTACACACTGTCTTCATACATACCTGAATGGTCATGTCATCACATCAGTCTTTGTGCTTCCCAGATCCTGTGTGCGGTACGATCAATCACAGTATTATAGGTGATCAGAATGATTGATAGTGTTGTTTTTATAATGTTAATGATTAGTAGAATGTAGACTATTGTGATTCTGTAATGATGTAGATTTCTAGTTGAGGAGCACAACGATGTGATT

Function

NR:

description
monocarboxylate transporter 1-like

GO: NA

KEGG:

id description
K08179 SLC16A1; MFS transporter, MCT family, solute carrier family 16 (monocarboxylic acid transporters), member 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036947863.1 True 2492 mRNA 0.49 5 78324077 78381586
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110492720 LOC106573003 coding downstream 9129 78206139 ~ 78314948 (-)
LOC110492727 NA coding downstream 120309 78201885 ~ 78203768 (-)
ndnl2 LOC106593143 coding downstream 130410 78167965 ~ 78193667 (-)
LOC110512774 LOC106566310 coding downstream 186653 78104580 ~ 78137424 (-)
dnase1l1 LOC106566338 coding downstream 227697 78071619 ~ 78096380 (-)
ccdc115 ccdc115 coding upstream 22584 78404170 ~ 78414670 (-)
trnae-uuc-7 NA coding upstream 37232 78418818 ~ 78418889 (-)
trnan-guu-13 NA coding upstream 40392 78421978 ~ 78422051 (-)
fkbpl LOC106591935 coding upstream 60045 78441631 ~ 78454461 (-)
G1412115 NA non-coding downstream 50000 78273455 ~ 78274077 (-)
G1412110 NA non-coding downstream 59672 78263982 ~ 78264405 (-)
G1412102 NA non-coding downstream 76679 78246162 ~ 78247398 (-)
G1411857 NA non-coding downstream 128440 78194864 ~ 78195637 (-)
G1411909 NA non-coding downstream 144809 78178805 ~ 78179268 (-)
G1412169 NA non-coding upstream 70757 78452343 ~ 78453268 (-)
G1412193 NA non-coding upstream 74858 78456444 ~ 78456887 (-)
G1412200 NA non-coding upstream 101891 78483477 ~ 78483683 (-)
G1412202 NA non-coding upstream 105175 78486761 ~ 78486961 (-)
G1412091 NA other downstream 5079 78316317 ~ 78318998 (-)
G1411845 rl10 other downstream 256567 78056967 ~ 78067510 (-)
G1411862 NA other downstream 270939 78050266 ~ 78053138 (-)
G1411366 NA other downstream 972852 77349553 ~ 77351225 (-)
G1411281 NA other downstream 1158254 77165458 ~ 77165823 (-)
G1412203 LOC100136012 other upstream 122705 78504291 ~ 78511632 (-)

Expression

LOC110492722(LOC106566331) Expression in all Baseline Samples

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The chart has 1 Y axis displaying values. Range: 0 to 20.
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LOC110492722(LOC106566331) Expression in each Bioproject

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LOC110492722(LOC106566331) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 400.
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Co-expression Network