G1330548 (LOC106591119)


Basic Information

Item Value
gene id G1330548
gene name LOC106591119
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 24932 ~ 38125 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1520576
tgaccctgctgCAGGGTCACCATCTTCTCCTCCAACTCTTTCTTCTTCGCCAGAGCCTTGGCCAAGTCTGCTGTCATCTTCTCATAGTTCTCCTTCATGTTGGCCatctccttctcagtctcagcGCTCTTCAGCAGGGGCTTGATCTTGAAGTACACCTTCATCCATGGCCAGGTTTTCACATTCATGAATGAACGGATGTTGTACTGGATGGAGTAGACGGCATCTCT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1520576 True 230 lncRNA 0.50 2 24932 38125

Neighbor

gene id symbol gene type direction distance location
LOC110491242 LOC106578741 coding downstream 94157 132282 ~ 150267 (+)
LOC110491220 NA coding downstream 292039 330164 ~ 425574 (+)
LOC110517286 sipa1l2 coding downstream 420147 458272 ~ 775818 (+)
egln1a NA coding downstream 1003813 1041938 ~ 1087375 (+)
nid1a LOC106578745 coding downstream 1120312 1158437 ~ 1239914 (+)
G1330550 NA non-coding downstream 20997 59122 ~ 112394 (+)
G1330578 NA non-coding downstream 33276 71401 ~ 81588 (+)
G1330658 NA non-coding downstream 118126 156251 ~ 216307 (+)
G1330671 NA non-coding downstream 137202 175327 ~ 175911 (+)
G1330684 NA non-coding downstream 167518 205643 ~ 208826 (+)
G1330676 NA other downstream 149592 187717 ~ 190795 (+)
G1330718 NA other downstream 281748 317523 ~ 328224 (+)
G1330834 NA other downstream 301951 340076 ~ 341076 (+)
G1331652 NA other downstream 1400662 1438787 ~ 1439125 (+)

Expression


Co-expression Network