G1330578


Basic Information

Item Value
gene id G1330578
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 71401 ~ 81588 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1520615
taggtatcctccttcccctttccctttacaactgactaggtatcccctttcccctttccctttacaactgactagatatccccctttaccTTTACAACTGagtagatatccccctttccctttacaactgactaggtatccccctttacctttccctttacaactgactatgtatccccctttccctttccctttacaactgactaggtatccccctttacctttacctttacaactgactaggtatccccctttacctttccctttacaactgactaggtatccccctttacctttccctttacaactgactagatatcccccttaacaactgactagatatccccatttccaattgactaggtatccccctttacctttccctttacaactgactaggtattcccctttccctttccctttacaactgactaggtatccccctttacctttccctttacaactgactaggtatccccctttacctttccctttacaactgactaggtatccccctttacctttccctttacaactgactaggtattcccctttcccttaacaactgactagatatccccatttccaattgactaggtatccccctttacctttccctttacaactgactaggtatccccctttacctttccctttacaactgactaggtatttcccctttccctttccctttacaactgactagatatccccatttccaattgactaggtatccccctttacctttccctttacaactgactaggtatccccctttacctttccctttacaactgactaggtatccccctttccctttacaactgactaggtatccccatttccctttccaacttactaggtatccccctttccctttacaactgactaggtatccccctttccctttccaactgactagatatccccctttccaactgactaggtatccccctttccctttccctttacaactgactaggtatcccccttcccctttccctttacaactgactaggtatcccccttcccctttccaactgactatgtatcccccttcccctttccctttacaactgactatgtatccccctttccctttccctttacaactgactaggtaccccccttcccc

Function

NR:

description
PREDICTED: uncharacterized protein LOC106591269 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1520615 True 1135 lncRNA 0.45 3 71401 81588

Neighbor

gene id symbol gene type direction distance location
LOC110491242 LOC106578741 coding downstream 50694 132282 ~ 150267 (+)
LOC110491220 NA coding downstream 248576 330164 ~ 425574 (+)
LOC110517286 sipa1l2 coding downstream 376684 458272 ~ 775818 (+)
egln1a NA coding downstream 960350 1041938 ~ 1087375 (+)
nid1a LOC106578745 coding downstream 1076849 1158437 ~ 1239914 (+)
G1330548 LOC106591119 non-coding upstream 33276 24932 ~ 38125 (+)
G1330658 NA non-coding downstream 74663 156251 ~ 216307 (+)
G1330671 NA non-coding downstream 93739 175327 ~ 175911 (+)
G1330684 NA non-coding downstream 124055 205643 ~ 208826 (+)
G1330682 NA non-coding downstream 129368 210956 ~ 211950 (+)
G1330702 NA non-coding downstream 159763 241351 ~ 241896 (+)
G1330556 NA other upstream 35364 33661 ~ 36037 (+)
G1330676 NA other downstream 106129 187717 ~ 190795 (+)
G1330718 NA other downstream 238285 317523 ~ 328224 (+)
G1330834 NA other downstream 258488 340076 ~ 341076 (+)
G1331652 NA other downstream 1357199 1438787 ~ 1439125 (+)

Expression


Co-expression Network