Gene
RNA
| Item | Value |
|---|---|
| gene id | G1330684 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 205643 ~ 208826 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1520751 | True | 221 | lncRNA | 0.35 | 2 | 205643 | 208826 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110491242 | LOC106578741 | coding | upstream | 55376 | 132282 ~ 150267 (+) |
| LOC110491220 | NA | coding | downstream | 121338 | 330164 ~ 425574 (+) |
| LOC110517286 | sipa1l2 | coding | downstream | 249446 | 458272 ~ 775818 (+) |
| egln1a | NA | coding | downstream | 833112 | 1041938 ~ 1087375 (+) |
| nid1a | LOC106578745 | coding | downstream | 949611 | 1158437 ~ 1239914 (+) |
| lyst | LOC106578744 | coding | downstream | 1039188 | 1248014 ~ 1490396 (+) |
| G1330671 | NA | non-coding | upstream | 29732 | 175327 ~ 175911 (+) |
| G1330550 | NA | non-coding | upstream | 93249 | 59122 ~ 112394 (+) |
| G1330578 | NA | non-coding | upstream | 124055 | 71401 ~ 81588 (+) |
| G1330548 | LOC106591119 | non-coding | upstream | 167518 | 24932 ~ 38125 (+) |
| G1330682 | NA | non-coding | downstream | 2130 | 210956 ~ 211950 (+) |
| G1330702 | NA | non-coding | downstream | 32525 | 241351 ~ 241896 (+) |
| G1330707 | LOC106578738 | non-coding | downstream | 44545 | 253371 ~ 260036 (+) |
| G1330718 | NA | non-coding | downstream | 108697 | 317523 ~ 328224 (+) |
| G1330738 | NA | non-coding | downstream | 109694 | 318520 ~ 318902 (+) |
| G1330676 | NA | other | upstream | 14848 | 187717 ~ 190795 (+) |
| G1330556 | NA | other | upstream | 169606 | 33661 ~ 36037 (+) |
| G1330834 | NA | other | downstream | 131250 | 340076 ~ 341076 (+) |
| G1331652 | NA | other | downstream | 1229961 | 1438787 ~ 1439125 (+) |
| G1332260 | NA | other | downstream | 1720498 | 1929324 ~ 1930473 (+) |
