G1331472


Basic Information

Item Value
gene id G1331472
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 1132763 ~ 1133062 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1521661
ctgccaaggcagcagctactcttcccggggtttattatggatccccattagttcctttcaagacagcagctactcttcctggggtttattatggatccccattagttcctgccaaggcagcagctactcttcctggggtttattatggatccccattagttcctttcaagacagcagctactcttcctggggtttattatggatccccattagttcttgccaaggcagcagctactcttcctggggtttattatggatccccattagttcctgtcaaggcagcagctactcttcctgggg

Function

NR:

description
uncharacterized protein LOC100142646

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1521661 True 300 lncRNA 0.49 1 1132763 1133062

Neighbor

gene id symbol gene type direction distance location
egln1a NA coding upstream 45388 1041938 ~ 1087375 (+)
LOC110517286 sipa1l2 coding upstream 356945 458272 ~ 775818 (+)
LOC110491220 NA coding upstream 707189 330164 ~ 425574 (+)
LOC110491242 LOC106578741 coding upstream 982496 132282 ~ 150267 (+)
nid1a LOC106578745 coding downstream 25375 1158437 ~ 1239914 (+)
lyst LOC106578744 coding downstream 114952 1248014 ~ 1490396 (+)
LOC118939493 NA coding downstream 291244 1424306 ~ 1425318 (+)
LOC110491205 gng4 coding downstream 368382 1501444 ~ 1516250 (+)
LOC110491206 NA coding downstream 389194 1522256 ~ 1525409 (+)
G1331470 gpr137b non-coding upstream 8758 1123264 ~ 1124005 (+)
G1331464 NA non-coding upstream 16329 1114991 ~ 1116434 (+)
G1331454 NA non-coding upstream 41595 1090924 ~ 1091168 (+)
G1331439 NA non-coding upstream 106538 1025857 ~ 1026225 (+)
G1331473 NA non-coding downstream 497 1133559 ~ 1133926 (+)
G1331563 NA non-coding downstream 15641 1148703 ~ 1149241 (+)
G1331566 NA non-coding downstream 16961 1150023 ~ 1150329 (+)
G1331571 NA non-coding downstream 20254 1153316 ~ 1153642 (+)
G1331586 NA non-coding downstream 57544 1190606 ~ 1191466 (+)
G1330834 NA other upstream 791687 340076 ~ 341076 (+)
G1330718 NA other upstream 804539 317523 ~ 328224 (+)
G1330676 NA other upstream 941968 187717 ~ 190795 (+)
G1330556 NA other upstream 1096726 33661 ~ 36037 (+)
G1331652 NA other downstream 305725 1438787 ~ 1439125 (+)
G1332260 NA other downstream 796262 1929324 ~ 1930473 (+)
G1332261 NA other downstream 797692 1930754 ~ 1931132 (+)
heatr5b LOC106578753 other downstream 1162794 2295839 ~ 2571759 (+)
LOC110491239 LOC106578780 other downstream 1798158 2931169 ~ 2939940 (+)

Expression


Co-expression Network