G1331563


Basic Information

Item Value
gene id G1331563
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 1148703 ~ 1149241 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1521757
ggcaggtagcctagtggttagagtgtaggggcggcaggtagcctagtggttagagtgtaggggcggcaggtagcctagtggttagagtgtaggggcggcaggtaccctagtggttagagtgtaggggcggcaggtagcctagtggttagagtgtaggggcggcaggtagcctagtggttagagtgttggggcggcaggtagcctagtggttagagtgttg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1521757 True 220 lncRNA 0.59 2 1148703 1149241

Neighbor

gene id symbol gene type direction distance location
egln1a NA coding upstream 61328 1041938 ~ 1087375 (+)
LOC110517286 sipa1l2 coding upstream 372885 458272 ~ 775818 (+)
LOC110491220 NA coding upstream 723129 330164 ~ 425574 (+)
LOC110491242 LOC106578741 coding upstream 998436 132282 ~ 150267 (+)
nid1a LOC106578745 coding downstream 9196 1158437 ~ 1239914 (+)
lyst LOC106578744 coding downstream 98773 1248014 ~ 1490396 (+)
LOC118939493 NA coding downstream 275065 1424306 ~ 1425318 (+)
LOC110491205 gng4 coding downstream 352203 1501444 ~ 1516250 (+)
LOC110491206 NA coding downstream 373015 1522256 ~ 1525409 (+)
G1331473 NA non-coding upstream 14777 1133559 ~ 1133926 (+)
G1331472 NA non-coding upstream 15641 1132763 ~ 1133062 (+)
G1331470 gpr137b non-coding upstream 24698 1123264 ~ 1124005 (+)
G1331464 NA non-coding upstream 32269 1114991 ~ 1116434 (+)
G1331454 NA non-coding upstream 57535 1090924 ~ 1091168 (+)
G1331566 NA non-coding downstream 782 1150023 ~ 1150329 (+)
G1331571 NA non-coding downstream 4075 1153316 ~ 1153642 (+)
G1331586 NA non-coding downstream 41365 1190606 ~ 1191466 (+)
G1331622 NA non-coding downstream 176243 1325484 ~ 1325791 (+)
G1331623 NA non-coding downstream 177096 1326337 ~ 1327156 (+)
G1330834 NA other upstream 807627 340076 ~ 341076 (+)
G1330718 NA other upstream 820479 317523 ~ 328224 (+)
G1330676 NA other upstream 957908 187717 ~ 190795 (+)
G1330556 NA other upstream 1112666 33661 ~ 36037 (+)
G1331652 NA other downstream 289546 1438787 ~ 1439125 (+)
G1332260 NA other downstream 780083 1929324 ~ 1930473 (+)
G1332261 NA other downstream 781513 1930754 ~ 1931132 (+)
heatr5b LOC106578753 other downstream 1146615 2295839 ~ 2571759 (+)
LOC110491239 LOC106578780 other downstream 1781979 2931169 ~ 2939940 (+)

Expression


Co-expression Network