G1331677


Basic Information

Item Value
gene id G1331677
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 1503578 ~ 1503808 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1521893
GTCATGATGGTGATGAACGGGGCTGTAATGGTAGGATGGGCTGTTTCCCCAGTCATGATGGTGATGAACAGGGCTGTAATGGTAGGATGGGCTGTTTCCCAGTCATGATGGTGATGAACAGGGCTGTAATGGTAGGATGGGCTGTTTCCCAGTCATGATGGTGATGAACAGGGCTGTAATGGTAGGATGGGCTGTTTCCCAGTCATGATGGTGATGAACAGGGCTGTAATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1521893 True 231 lncRNA 0.50 1 1503578 1503808

Neighbor

gene id symbol gene type direction distance location
lyst LOC106578744 coding upstream 13182 1248014 ~ 1490396 (+)
LOC118939493 NA coding upstream 78260 1424306 ~ 1425318 (+)
nid1a LOC106578745 coding upstream 263664 1158437 ~ 1239914 (+)
egln1a NA coding upstream 416203 1041938 ~ 1087375 (+)
LOC110517286 sipa1l2 coding upstream 727760 458272 ~ 775818 (+)
LOC110491206 NA coding downstream 18448 1522256 ~ 1525409 (+)
b3galnt2 b3galnt2 coding downstream 25290 1529098 ~ 1556109 (+)
LOC118939494 NA coding downstream 52659 1556467 ~ 1558333 (+)
arid4b arid4b coding downstream 107936 1611744 ~ 1825933 (+)
LOC118939496 NA coding downstream 267441 1771249 ~ 1774594 (+)
G1331676 NA non-coding upstream 29 1503341 ~ 1503549 (+)
G1331639 NA non-coding upstream 9434 1491795 ~ 1494144 (+)
G1331662 NA non-coding upstream 35695 1466588 ~ 1467883 (+)
G1331648 NA non-coding upstream 90031 1412989 ~ 1413547 (+)
G1331633 NA non-coding upstream 142890 1360400 ~ 1360688 (+)
G1331688 NA non-coding downstream 9362 1513170 ~ 1513536 (+)
G1331690 NA non-coding downstream 22678 1526486 ~ 1526711 (+)
G1331694 NA non-coding downstream 32736 1536544 ~ 1560081 (+)
G1331714 NA non-coding downstream 69563 1573371 ~ 1573968 (+)
G1331652 NA other upstream 64453 1438787 ~ 1439125 (+)
LOC110491220 NA other upstream 1080304 330164 ~ 425574 (+)
G1330834 NA other upstream 1162502 340076 ~ 341076 (+)
G1330718 NA other upstream 1175354 317523 ~ 328224 (+)
G1330676 NA other upstream 1312783 187717 ~ 190795 (+)
G1332260 NA other downstream 425516 1929324 ~ 1930473 (+)
G1332261 NA other downstream 426946 1930754 ~ 1931132 (+)
heatr5b LOC106578753 other downstream 792048 2295839 ~ 2571759 (+)
LOC110491239 LOC106578780 other downstream 1427412 2931169 ~ 2939940 (+)
G1332701 NA other downstream 1469000 2972808 ~ 2973800 (+)

Expression


Co-expression Network