Gene
RNA
| Item | Value |
|---|---|
| gene id | G1331694 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 1536544 ~ 1560081 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1521934 | True | 550 | lncRNA | 0.42 | 2 | 1536544 | 1560081 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110491206 | NA | coding | upstream | 11135 | 1522256 ~ 1525409 (+) |
| LOC110491205 | gng4 | coding | upstream | 20294 | 1501444 ~ 1516250 (+) |
| lyst | LOC106578744 | coding | upstream | 46148 | 1248014 ~ 1490396 (+) |
| LOC118939493 | NA | coding | upstream | 111226 | 1424306 ~ 1425318 (+) |
| nid1a | LOC106578745 | coding | upstream | 296630 | 1158437 ~ 1239914 (+) |
| arid4b | arid4b | coding | downstream | 51663 | 1611744 ~ 1825933 (+) |
| LOC118939496 | NA | coding | downstream | 211168 | 1771249 ~ 1774594 (+) |
| tomm20a | tomm20 | coding | downstream | 271947 | 1832028 ~ 1838160 (+) |
| LOC110491199 | i2b2b | coding | downstream | 418759 | 1978840 ~ 1982341 (+) |
| heatr5b | LOC106578753 | coding | downstream | 735758 | 2295839 ~ 2571759 (+) |
| G1331690 | NA | non-coding | upstream | 9833 | 1526486 ~ 1526711 (+) |
| G1331688 | NA | non-coding | upstream | 23008 | 1513170 ~ 1513536 (+) |
| G1331677 | NA | non-coding | upstream | 32736 | 1503578 ~ 1503808 (+) |
| G1331676 | NA | non-coding | upstream | 32995 | 1503341 ~ 1503549 (+) |
| G1331639 | NA | non-coding | upstream | 42400 | 1491795 ~ 1494144 (+) |
| G1331714 | NA | non-coding | downstream | 13290 | 1573371 ~ 1573968 (+) |
| G1331734 | NA | non-coding | downstream | 39874 | 1599955 ~ 1600307 (+) |
| G1331741 | NA | non-coding | downstream | 46868 | 1606949 ~ 1609052 (+) |
| G1331757 | NA | non-coding | downstream | 85756 | 1645837 ~ 1732281 (+) |
| G1331759 | NA | non-coding | downstream | 92380 | 1652461 ~ 1653351 (+) |
| G1331652 | NA | other | upstream | 97419 | 1438787 ~ 1439125 (+) |
| LOC110491220 | NA | other | upstream | 1113270 | 330164 ~ 425574 (+) |
| G1330834 | NA | other | upstream | 1195468 | 340076 ~ 341076 (+) |
| G1330718 | NA | other | upstream | 1208320 | 317523 ~ 328224 (+) |
| G1330676 | NA | other | upstream | 1345749 | 187717 ~ 190795 (+) |
| G1332260 | NA | other | downstream | 369243 | 1929324 ~ 1930473 (+) |
| G1332261 | NA | other | downstream | 370673 | 1930754 ~ 1931132 (+) |
| LOC110491239 | LOC106578780 | other | downstream | 1371139 | 2931169 ~ 2939940 (+) |
| G1332701 | NA | other | downstream | 1412727 | 2972808 ~ 2973800 (+) |
