G1331714


Basic Information

Item Value
gene id G1331714
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 1573371 ~ 1573968 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1521959
ttgggttgtgccgtggcggaggtctttgtgggctatactcggccttgtctcaggatgaggacctgagccctaggaccatgcctcagtactacctggcctgatgactttagtccacctggccgtgctgctgctccagtttcaactgttctgcctgcggctatggaaccctgacctgttcaccggacgtgctacctgtcccagacctgctgttttcaactggttcttctctaggtttcttcctaggttccggcctttctaggaaAATTTTCCTAGCcgctgtgcttctacacctgcattgcttgctgtttggggttttaggctgggtttct

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1521959 True 329 lncRNA 0.54 2 1573371 1573968

Neighbor

gene id symbol gene type direction distance location
LOC118939494 NA coding upstream 15038 1556467 ~ 1558333 (+)
b3galnt2 b3galnt2 coding upstream 17265 1529098 ~ 1556109 (+)
LOC110491206 NA coding upstream 47962 1522256 ~ 1525409 (+)
LOC110491205 gng4 coding upstream 57121 1501444 ~ 1516250 (+)
lyst LOC106578744 coding upstream 82975 1248014 ~ 1490396 (+)
arid4b arid4b coding downstream 37776 1611744 ~ 1825933 (+)
LOC118939496 NA coding downstream 197281 1771249 ~ 1774594 (+)
tomm20a tomm20 coding downstream 258060 1832028 ~ 1838160 (+)
LOC110491199 i2b2b coding downstream 404872 1978840 ~ 1982341 (+)
heatr5b LOC106578753 coding downstream 721871 2295839 ~ 2571759 (+)
G1331694 NA non-coding upstream 13290 1536544 ~ 1560081 (+)
G1331690 NA non-coding upstream 46660 1526486 ~ 1526711 (+)
G1331688 NA non-coding upstream 59835 1513170 ~ 1513536 (+)
G1331677 NA non-coding upstream 69563 1503578 ~ 1503808 (+)
G1331734 NA non-coding downstream 25987 1599955 ~ 1600307 (+)
G1331741 NA non-coding downstream 32981 1606949 ~ 1609052 (+)
G1331757 NA non-coding downstream 71869 1645837 ~ 1732281 (+)
G1331759 NA non-coding downstream 78493 1652461 ~ 1653351 (+)
G1331782 NA non-coding downstream 123371 1697339 ~ 1704664 (+)
G1331652 NA other upstream 134246 1438787 ~ 1439125 (+)
LOC110491220 NA other upstream 1150097 330164 ~ 425574 (+)
G1330834 NA other upstream 1232295 340076 ~ 341076 (+)
G1330718 NA other upstream 1245147 317523 ~ 328224 (+)
G1330676 NA other upstream 1382576 187717 ~ 190795 (+)
G1332260 NA other downstream 355356 1929324 ~ 1930473 (+)
G1332261 NA other downstream 356786 1930754 ~ 1931132 (+)
LOC110491239 LOC106578780 other downstream 1357252 2931169 ~ 2939940 (+)
G1332701 NA other downstream 1398840 2972808 ~ 2973800 (+)

Expression


Co-expression Network