G1331757


Basic Information

Item Value
gene id G1331757
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 1645837 ~ 1732281 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1522014
ccccttgaactttgcgaccttttgccacatttcaggcttcaaacataaagatataaaactgtatttttttgtgaagaatcaacaacaagtggaacacaatcatgaagtggaacgacatttattggatatttcggacttttttaacaaatcaaaaactgaaaaattgggcgtgcaaaattattcagcccctttactttcagtgcagcaaactctctcca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1522014 True 218 lncRNA 0.36 2 1645837 1732281

Neighbor

gene id symbol gene type direction distance location
LOC118939494 NA coding upstream 87504 1556467 ~ 1558333 (+)
b3galnt2 b3galnt2 coding upstream 89731 1529098 ~ 1556109 (+)
LOC110491206 NA coding upstream 120428 1522256 ~ 1525409 (+)
LOC110491205 gng4 coding upstream 129587 1501444 ~ 1516250 (+)
LOC118939493 NA coding upstream 220519 1424306 ~ 1425318 (+)
LOC118939496 NA coding downstream 38968 1771249 ~ 1774594 (+)
tomm20a tomm20 coding downstream 99747 1832028 ~ 1838160 (+)
LOC110491199 i2b2b coding downstream 246559 1978840 ~ 1982341 (+)
heatr5b LOC106578753 coding downstream 563558 2295839 ~ 2571759 (+)
LOC110535007 LOC106578653 coding downstream 848012 2580293 ~ 2631155 (+)
G1331741 NA non-coding upstream 36785 1606949 ~ 1609052 (+)
G1331734 NA non-coding upstream 45530 1599955 ~ 1600307 (+)
G1331714 NA non-coding upstream 71869 1573371 ~ 1573968 (+)
G1331694 NA non-coding upstream 85756 1536544 ~ 1560081 (+)
G1331810 NA non-coding downstream 25453 1757734 ~ 1760306 (+)
G1331820 NA non-coding downstream 65380 1797661 ~ 1797908 (+)
G1331745 NA non-coding downstream 97318 1829599 ~ 1831374 (+)
G1332202 NA non-coding downstream 131949 1864230 ~ 1864462 (+)
G1331652 NA other upstream 206712 1438787 ~ 1439125 (+)
LOC110491220 NA other upstream 1222563 330164 ~ 425574 (+)
G1330834 NA other upstream 1304761 340076 ~ 341076 (+)
G1330718 NA other upstream 1317613 317523 ~ 328224 (+)
G1330676 NA other upstream 1455042 187717 ~ 190795 (+)
G1332260 NA other downstream 197043 1929324 ~ 1930473 (+)
G1332261 NA other downstream 198473 1930754 ~ 1931132 (+)
LOC110491239 LOC106578780 other downstream 1198939 2931169 ~ 2939940 (+)
G1332701 NA other downstream 1240527 2972808 ~ 2973800 (+)

Expression


Co-expression Network