G1331759


Basic Information

Item Value
gene id G1331759
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 1652461 ~ 1653351 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1522016
tggaaggtgacagaactagagcagtgttggtcagaccaggagacatcccatctgaggtggaaggtaacagaactagaacagtgttggtcagaccaggagacatcccatctgtggtggaaggtaacagaactagagcagtgttggtcagaccaggagacatcccatctgtggtggaaggtaacagaactagaacagtgttggtcagaccatgagacatcccatctgtggtggaaggtaaACAGACCTAGagcagtgttggtcagaccatgagacatcccatctgtggtggaaggtaacagaactagagcagtgttggtcagaccaggagacatcccatctgtggtggaaggtaacAGAACTAGAACAGTGTTGGTCAGAcaaggagacatcccatctgtggtggaggtgacagaactagagcagtgttggtcagaccaggagacatcccatctgtggtggaaggtaacagaactagaacagtgttggtcagaccaggagacatcccatctgtggtggaaggtaacAGAACCAGagcagtgttggtcagaccaggagacatcccatctgtggtggaaggtaacagaactagaacagtgttggtcagaccaggagacatcccatctgaggtggaaggtaacagaactagaacagtgttggtcagaccaggagacatcccatctgaggtggaAGGTAACAGAGCTAGAACAGTGttggtcagaccatgagacatcccatctgtggtggaaggtggcagaactagagcagtgttggtcagac

Function

NR:

description
PREDICTED: uncharacterized protein LOC102076598

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1522016 True 777 lncRNA 0.50 2 1652461 1653351

Neighbor

gene id symbol gene type direction distance location
LOC118939494 NA coding upstream 94128 1556467 ~ 1558333 (+)
b3galnt2 b3galnt2 coding upstream 96355 1529098 ~ 1556109 (+)
LOC110491206 NA coding upstream 127052 1522256 ~ 1525409 (+)
LOC110491205 gng4 coding upstream 136211 1501444 ~ 1516250 (+)
LOC118939493 NA coding upstream 227143 1424306 ~ 1425318 (+)
LOC118939496 NA coding downstream 117898 1771249 ~ 1774594 (+)
tomm20a tomm20 coding downstream 178677 1832028 ~ 1838160 (+)
LOC110491199 i2b2b coding downstream 325489 1978840 ~ 1982341 (+)
heatr5b LOC106578753 coding downstream 642488 2295839 ~ 2571759 (+)
LOC110535007 LOC106578653 coding downstream 926942 2580293 ~ 2631155 (+)
G1331741 NA non-coding upstream 43409 1606949 ~ 1609052 (+)
G1331734 NA non-coding upstream 52154 1599955 ~ 1600307 (+)
G1331714 NA non-coding upstream 78493 1573371 ~ 1573968 (+)
G1331694 NA non-coding upstream 92380 1536544 ~ 1560081 (+)
G1331782 NA non-coding downstream 43988 1697339 ~ 1704664 (+)
G1331788 NA non-coding downstream 54282 1707633 ~ 1707907 (+)
G1331810 NA non-coding downstream 104383 1757734 ~ 1760306 (+)
G1331820 NA non-coding downstream 144310 1797661 ~ 1797908 (+)
G1331652 NA other upstream 213336 1438787 ~ 1439125 (+)
LOC110491220 NA other upstream 1229187 330164 ~ 425574 (+)
G1330834 NA other upstream 1311385 340076 ~ 341076 (+)
G1330718 NA other upstream 1324237 317523 ~ 328224 (+)
G1330676 NA other upstream 1461666 187717 ~ 190795 (+)
G1332260 NA other downstream 275973 1929324 ~ 1930473 (+)
G1332261 NA other downstream 277403 1930754 ~ 1931132 (+)
LOC110491239 LOC106578780 other downstream 1277869 2931169 ~ 2939940 (+)
G1332701 NA other downstream 1319457 2972808 ~ 2973800 (+)

Expression


Co-expression Network