Gene
RNA
| Item | Value |
|---|---|
| gene id | G1332665 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 2808485 ~ 2808713 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1523154 | True | 229 | lncRNA | 0.35 | 1 | 2808485 | 2808713 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110535007 | LOC106578653 | coding | upstream | 177330 | 2580293 ~ 2631155 (+) |
| heatr5b | LOC106578753 | coding | upstream | 236726 | 2295839 ~ 2571759 (+) |
| LOC110491199 | i2b2b | coding | upstream | 826144 | 1978840 ~ 1982341 (+) |
| tomm20a | tomm20 | coding | upstream | 970325 | 1832028 ~ 1838160 (+) |
| LOC118939496 | NA | coding | upstream | 1033891 | 1771249 ~ 1774594 (+) |
| LOC110491239 | LOC106578780 | coding | downstream | 122456 | 2931169 ~ 2939940 (+) |
| trnah-gug-6 | NA | coding | downstream | 136276 | 2944989 ~ 2945060 (+) |
| memo1 | LOC106578779 | coding | downstream | 136699 | 2945412 ~ 2969606 (+) |
| LOC110492798 | LOC106590888 | coding | downstream | 180490 | 2989203 ~ 3054026 (+) |
| LOC110492796 | slx4ip | coding | downstream | 256352 | 3065065 ~ 3201726 (+) |
| G1332658 | NA | non-coding | upstream | 20930 | 2787331 ~ 2787555 (+) |
| G1332637 | NA | non-coding | upstream | 60347 | 2745739 ~ 2748138 (+) |
| G1332620 | NA | non-coding | upstream | 104020 | 2702371 ~ 2704465 (+) |
| G1332596 | vit | non-coding | upstream | 142552 | 2652480 ~ 2665933 (+) |
| G1332595 | NA | non-coding | upstream | 158529 | 2649100 ~ 2649956 (+) |
| G1332672 | NA | non-coding | downstream | 20243 | 2828956 ~ 2829167 (+) |
| G1332673 | NA | non-coding | downstream | 20486 | 2829199 ~ 2829463 (+) |
| G1332674 | NA | non-coding | downstream | 24763 | 2833476 ~ 2833690 (+) |
| G1332677 | NA | non-coding | downstream | 26764 | 2835477 ~ 2835817 (+) |
| G1332691 | NA | non-coding | downstream | 72538 | 2881251 ~ 2881678 (+) |
| G1332261 | NA | other | upstream | 877353 | 1930754 ~ 1931132 (+) |
| G1332260 | NA | other | upstream | 878012 | 1929324 ~ 1930473 (+) |
| G1331652 | NA | other | upstream | 1369360 | 1438787 ~ 1439125 (+) |
| LOC110491220 | NA | other | upstream | 2385211 | 330164 ~ 425574 (+) |
| G1332701 | NA | other | downstream | 164095 | 2972808 ~ 2973800 (+) |
| G1332826 | NA | other | downstream | 421486 | 3230199 ~ 3231407 (+) |
| G1333963 | NA | other | downstream | 1531125 | 4339838 ~ 4341823 (+) |
