G1332673


Basic Information

Item Value
gene id G1332673
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 2829199 ~ 2829463 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1523162
ggaagactgaatctgcaataggtaatcagcttggtttgaagaaatcaactgtgggagcaattattaggaaatggaagacatacaagaccactgataatctccctcgatctggggctccacgcaagatctcaccccatggggtcaaaatgatcacaagaacggtgagcaaaaatcccagaaccacacggggggacctagtgaatgacctgcagaaagctgggaccaaagtaacaaagcctaccatcagtaacacactacgccgcca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1523162 True 265 lncRNA 0.48 1 2829199 2829463

Neighbor

gene id symbol gene type direction distance location
LOC110535007 LOC106578653 coding upstream 198044 2580293 ~ 2631155 (+)
heatr5b LOC106578753 coding upstream 257440 2295839 ~ 2571759 (+)
LOC110491199 i2b2b coding upstream 846858 1978840 ~ 1982341 (+)
tomm20a tomm20 coding upstream 991039 1832028 ~ 1838160 (+)
LOC118939496 NA coding upstream 1054605 1771249 ~ 1774594 (+)
LOC110491239 LOC106578780 coding downstream 101706 2931169 ~ 2939940 (+)
trnah-gug-6 NA coding downstream 115526 2944989 ~ 2945060 (+)
memo1 LOC106578779 coding downstream 115949 2945412 ~ 2969606 (+)
LOC110492798 LOC106590888 coding downstream 159740 2989203 ~ 3054026 (+)
LOC110492796 slx4ip coding downstream 235602 3065065 ~ 3201726 (+)
G1332672 NA non-coding upstream 32 2828956 ~ 2829167 (+)
G1332665 NA non-coding upstream 20486 2808485 ~ 2808713 (+)
G1332658 NA non-coding upstream 41644 2787331 ~ 2787555 (+)
G1332637 NA non-coding upstream 81061 2745739 ~ 2748138 (+)
G1332620 NA non-coding upstream 124734 2702371 ~ 2704465 (+)
G1332674 NA non-coding downstream 4013 2833476 ~ 2833690 (+)
G1332677 NA non-coding downstream 6014 2835477 ~ 2835817 (+)
G1332691 NA non-coding downstream 51788 2881251 ~ 2881678 (+)
G1332688 NA non-coding downstream 52288 2881751 ~ 2882912 (+)
G1332711 NA non-coding downstream 136457 2965920 ~ 2966250 (+)
G1332261 NA other upstream 898067 1930754 ~ 1931132 (+)
G1332260 NA other upstream 898726 1929324 ~ 1930473 (+)
G1331652 NA other upstream 1390074 1438787 ~ 1439125 (+)
LOC110491220 NA other upstream 2405925 330164 ~ 425574 (+)
G1332701 NA other downstream 143345 2972808 ~ 2973800 (+)
G1332826 NA other downstream 400736 3230199 ~ 3231407 (+)
G1333963 NA other downstream 1510375 4339838 ~ 4341823 (+)

Expression


Co-expression Network