Gene
RNA
| Item | Value |
|---|---|
| gene id | G1332700 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 2970145 ~ 2970796 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1523190 | True | 540 | lncRNA | 0.39 | 2 | 2970145 | 2970796 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| memo1 | LOC106578779 | coding | upstream | 539 | 2945412 ~ 2969606 (+) |
| trnah-gug-6 | NA | coding | upstream | 25085 | 2944989 ~ 2945060 (+) |
| LOC110491239 | LOC106578780 | coding | upstream | 30205 | 2931169 ~ 2939940 (+) |
| LOC110535007 | LOC106578653 | coding | upstream | 338990 | 2580293 ~ 2631155 (+) |
| heatr5b | LOC106578753 | coding | upstream | 398386 | 2295839 ~ 2571759 (+) |
| LOC110492798 | LOC106590888 | coding | downstream | 18407 | 2989203 ~ 3054026 (+) |
| LOC110492796 | slx4ip | coding | downstream | 94269 | 3065065 ~ 3201726 (+) |
| LOC118939483 | NA | coding | downstream | 715747 | 3686543 ~ 3687093 (+) |
| LOC118939498 | LOC106591840 | coding | downstream | 723802 | 3694598 ~ 3730931 (+) |
| btbd3b | LOC106578575 | coding | downstream | 895688 | 3866484 ~ 3902198 (+) |
| G1332711 | NA | non-coding | upstream | 3895 | 2965920 ~ 2966250 (+) |
| G1332688 | NA | non-coding | upstream | 87233 | 2881751 ~ 2882912 (+) |
| G1332691 | NA | non-coding | upstream | 88467 | 2881251 ~ 2881678 (+) |
| G1332677 | NA | non-coding | upstream | 134328 | 2835477 ~ 2835817 (+) |
| G1332674 | NA | non-coding | upstream | 136455 | 2833476 ~ 2833690 (+) |
| G1332699 | NA | non-coding | downstream | 1652 | 2972448 ~ 2972727 (+) |
| G1332727 | NA | non-coding | downstream | 35401 | 3006197 ~ 3052569 (+) |
| G1332729 | NA | non-coding | downstream | 37243 | 3008039 ~ 3008695 (+) |
| G1332734 | NA | non-coding | downstream | 60577 | 3031373 ~ 3038088 (+) |
| G1332735 | NA | non-coding | downstream | 68683 | 3039479 ~ 3039986 (+) |
| G1332261 | NA | other | upstream | 1039013 | 1930754 ~ 1931132 (+) |
| G1332260 | NA | other | upstream | 1039672 | 1929324 ~ 1930473 (+) |
| G1331652 | NA | other | upstream | 1531020 | 1438787 ~ 1439125 (+) |
| G1332701 | NA | other | downstream | 2012 | 2972808 ~ 2973800 (+) |
| G1332826 | NA | other | downstream | 259403 | 3230199 ~ 3231407 (+) |
| G1333963 | NA | other | downstream | 1369042 | 4339838 ~ 4341823 (+) |
| LOC110491218 | LOC106578757 | other | downstream | 1763993 | 4640198 ~ 4973348 (+) |
