G1332699


Basic Information

Item Value
gene id G1332699
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 2972448 ~ 2972727 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1523188
gaatactttcgcaaggcactgtgtatatatgtatatgtgtgtgtgtatatatatatatatatatacatacatacatacacacatacacacacacacacacacacttctgaagGAGTGAAGTGAAAGGAGAGGTTAGTGTTCAGGATGGGAGGATCAGGTTACTGccctatagggtcctggtctgaagtcgtgccctataaagggattagggtgccatgtgggatatAGATAACCAGTTCACTAACTAACCCTCtgctgtaaaataaaaaaattaaaaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1523188 True 280 lncRNA 0.38 1 2972448 2972727

Neighbor

gene id symbol gene type direction distance location
memo1 LOC106578779 coding upstream 2842 2945412 ~ 2969606 (+)
trnah-gug-6 NA coding upstream 27388 2944989 ~ 2945060 (+)
LOC110491239 LOC106578780 coding upstream 32508 2931169 ~ 2939940 (+)
LOC110535007 LOC106578653 coding upstream 341293 2580293 ~ 2631155 (+)
heatr5b LOC106578753 coding upstream 400689 2295839 ~ 2571759 (+)
LOC110492798 LOC106590888 coding downstream 16476 2989203 ~ 3054026 (+)
LOC110492796 slx4ip coding downstream 92338 3065065 ~ 3201726 (+)
LOC118939483 NA coding downstream 713816 3686543 ~ 3687093 (+)
LOC118939498 LOC106591840 coding downstream 721871 3694598 ~ 3730931 (+)
btbd3b LOC106578575 coding downstream 893757 3866484 ~ 3902198 (+)
G1332700 NA non-coding upstream 1652 2970145 ~ 2970796 (+)
G1332711 NA non-coding upstream 6198 2965920 ~ 2966250 (+)
G1332688 NA non-coding upstream 89536 2881751 ~ 2882912 (+)
G1332691 NA non-coding upstream 90770 2881251 ~ 2881678 (+)
G1332677 NA non-coding upstream 136631 2835477 ~ 2835817 (+)
G1332727 NA non-coding downstream 33470 3006197 ~ 3052569 (+)
G1332729 NA non-coding downstream 35312 3008039 ~ 3008695 (+)
G1332734 NA non-coding downstream 58646 3031373 ~ 3038088 (+)
G1332735 NA non-coding downstream 66752 3039479 ~ 3039986 (+)
G1332261 NA other upstream 1041316 1930754 ~ 1931132 (+)
G1332260 NA other upstream 1041975 1929324 ~ 1930473 (+)
G1331652 NA other upstream 1533323 1438787 ~ 1439125 (+)
G1332701 NA other downstream 81 2972808 ~ 2973800 (+)
G1332826 NA other downstream 257472 3230199 ~ 3231407 (+)
G1333963 NA other downstream 1367111 4339838 ~ 4341823 (+)
LOC110491218 LOC106578757 other downstream 1762062 4640198 ~ 4973348 (+)

Expression


Co-expression Network