G1332739


Basic Information

Item Value
gene id G1332739
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 3056588 ~ 3057539 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1523248
tggtcacatacacatagttagcagatgttaatggtcacatacacatagttagcagatgttattggtcacatacacatagttagcagatgttaatggtcacatacacatagttagcagatgttattggtcacatacacatagttagcagatgttattggtcacatacacatggttagcagatgttaatggtcacatacacatggttagcagatgttaatggtcacatacacatggttagcagatgttaatggtcacatggttagcagatgttaatggtcacatggttagcagatgttaatggtcacatggttagcagatgttaatggtcacatacacatagttagcagatgttactggtcacatacacatagtt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1523248 True 373 lncRNA 0.38 2 3056588 3057539

Neighbor

gene id symbol gene type direction distance location
LOC110492798 LOC106590888 coding upstream 3100 2989203 ~ 3054026 (+)
memo1 LOC106578779 coding upstream 86982 2945412 ~ 2969606 (+)
trnah-gug-6 NA coding upstream 111528 2944989 ~ 2945060 (+)
LOC110491239 LOC106578780 coding upstream 116648 2931169 ~ 2939940 (+)
LOC110535007 LOC106578653 coding upstream 425433 2580293 ~ 2631155 (+)
LOC110492796 slx4ip coding downstream 7526 3065065 ~ 3201726 (+)
LOC118939483 NA coding downstream 629004 3686543 ~ 3687093 (+)
LOC118939498 LOC106591840 coding downstream 637059 3694598 ~ 3730931 (+)
btbd3b LOC106578575 coding downstream 808945 3866484 ~ 3902198 (+)
sptlc3 sptlc3 coding downstream 1076878 4134417 ~ 4229378 (+)
G1332727 NA non-coding upstream 4019 3006197 ~ 3052569 (+)
G1332735 NA non-coding upstream 16602 3039479 ~ 3039986 (+)
G1332734 NA non-coding upstream 18500 3031373 ~ 3038088 (+)
G1332729 NA non-coding upstream 47893 3008039 ~ 3008695 (+)
G1332758 NA non-coding downstream 36940 3094479 ~ 3094790 (+)
G1332770 NA non-coding downstream 64580 3122119 ~ 3122585 (+)
G1332774 NA non-coding downstream 73899 3131438 ~ 3132648 (+)
G1332784 NA non-coding downstream 101619 3159158 ~ 3160520 (+)
G1332788 NA non-coding downstream 112775 3170314 ~ 3171997 (+)
G1332701 NA other upstream 82788 2972808 ~ 2973800 (+)
heatr5b LOC106578753 other upstream 747021 2295839 ~ 2571759 (+)
G1332261 NA other upstream 1125456 1930754 ~ 1931132 (+)
G1332260 NA other upstream 1126115 1929324 ~ 1930473 (+)
G1332826 NA other downstream 172660 3230199 ~ 3231407 (+)
G1333963 NA other downstream 1282299 4339838 ~ 4341823 (+)
LOC110491218 LOC106578757 other downstream 1677250 4640198 ~ 4973348 (+)
G1334530 NA other downstream 2462401 5519940 ~ 5521230 (+)

Expression


Co-expression Network