G1332865


Basic Information

Item Value
gene id G1332865
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 3303968 ~ 3304310 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1523395
cagcaggaagcctagtggttagagtgtggggcagcaggaagcctagtggttagagtgtggggcagcaggtagtctagtggttagagtgttgggcagcaggaagcctagtggttagagtgttgggcagcaggaagcctagtggttagagtgttgggcagcaggaagcctagtggttagagtgttgggcagcaggaagcctagtggttagcgcgcgctggactagtaaccaaaagatcgaatccccgaactgacaaggtaaaattatgttgttctgcccctgaacaaggcagttaacccactgttccctggtag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1523395 True 312 lncRNA 0.53 2 3303968 3304310

Neighbor

gene id symbol gene type direction distance location
LOC110492796 slx4ip coding upstream 102242 3065065 ~ 3201726 (+)
LOC110492798 LOC106590888 coding upstream 250480 2989203 ~ 3054026 (+)
memo1 LOC106578779 coding upstream 334362 2945412 ~ 2969606 (+)
trnah-gug-6 NA coding upstream 358908 2944989 ~ 2945060 (+)
LOC110491239 LOC106578780 coding upstream 364028 2931169 ~ 2939940 (+)
LOC118939483 NA coding downstream 382233 3686543 ~ 3687093 (+)
LOC118939498 LOC106591840 coding downstream 390288 3694598 ~ 3730931 (+)
btbd3b LOC106578575 coding downstream 562174 3866484 ~ 3902198 (+)
sptlc3 sptlc3 coding downstream 830107 4134417 ~ 4229378 (+)
tasp1 tasp1 coding downstream 940688 4244998 ~ 4337416 (+)
G1332851 NA non-coding upstream 37329 3265339 ~ 3266639 (+)
G1332817 jag1 non-coding upstream 87690 3213114 ~ 3216278 (+)
G1332812 NA non-coding upstream 96934 3206487 ~ 3207034 (+)
G1332808 NA non-coding upstream 100533 3203210 ~ 3203435 (+)
G1333242 NA non-coding downstream 18320 3322630 ~ 3322925 (+)
G1333263 NA non-coding downstream 65148 3369458 ~ 3371640 (+)
G1333272 NA non-coding downstream 71896 3376206 ~ 3376413 (+)
G1333276 NA non-coding downstream 74429 3378739 ~ 3378972 (+)
G1333282 NA non-coding downstream 84278 3388588 ~ 3398294 (+)
G1332826 NA other upstream 72561 3230199 ~ 3231407 (+)
G1332701 NA other upstream 330168 2972808 ~ 2973800 (+)
heatr5b LOC106578753 other upstream 994401 2295839 ~ 2571759 (+)
G1333963 NA other downstream 1035528 4339838 ~ 4341823 (+)
LOC110491218 LOC106578757 other downstream 1430479 4640198 ~ 4973348 (+)
G1334530 NA other downstream 2215630 5519940 ~ 5521230 (+)
G1334592 NA other downstream 2399525 5703835 ~ 5704946 (+)
G1335704 NA other downstream 3286666 6590976 ~ 6591915 (+)

Expression


Co-expression Network