G1333333


Basic Information

Item Value
gene id G1333333
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 3489931 ~ 3490975 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1524035
CAGTAAAATACTGAGATCACAGTTACAAATACTGAGATCACAGTAAAATACTGAGATCACAGTTACAAATACTGAGATCACAGTAAAATACTGAGATCACAGTTACAAATACTGAGGTCACAGCTACAAATACTGAGATCACAGTTACAAATACTGAGGTCACAGTTACAAATACTGAGGTCACAGTTACAAATACCGAGATCACAGTAAAATACTGAGGTCACAGTTACAAATACTGAGATCACAGCTACAAATACTGAGATCACAGTTACAAATACTGAGATCACAGTAAAATACTGAGGTCACAGTTACAAATACTGAGATCACAGTTACAAATACTGAGATCACAGTAAAATACTGAGGTCACAGTTACAAATACTGAGATCACAGCTACAAATACTGAGATCACAGTTACAAATACTGAGGTCACAGTAAAATACtgaggtcacagttgcaaatacTGAGATCACAGTAAAATTCTGAGATCACAGTTACAAATACTGAGATCACAGTTACAAATACTGAGATCACAGTAAAATACtgaggtcacagttgcaaatacTGAGATCACAGTAAAATACTGAGATCACAGTTACAAATACTGAGATCACAGTTACAAATACTGAGGTCACAGTAAAATATTGAGATCATATTACAGATACTGAGATCATAGCAAAATACTGAGTTCACAGTTACAAATAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1524035 True 702 lncRNA 0.35 3 3489931 3490975

Neighbor

gene id symbol gene type direction distance location
LOC110492796 slx4ip coding upstream 288205 3065065 ~ 3201726 (+)
LOC110492798 LOC106590888 coding upstream 436443 2989203 ~ 3054026 (+)
memo1 LOC106578779 coding upstream 520325 2945412 ~ 2969606 (+)
trnah-gug-6 NA coding upstream 544871 2944989 ~ 2945060 (+)
LOC110491239 LOC106578780 coding upstream 549991 2931169 ~ 2939940 (+)
LOC118939483 NA coding downstream 195568 3686543 ~ 3687093 (+)
LOC118939498 LOC106591840 coding downstream 203623 3694598 ~ 3730931 (+)
btbd3b LOC106578575 coding downstream 375509 3866484 ~ 3902198 (+)
sptlc3 sptlc3 coding downstream 643442 4134417 ~ 4229378 (+)
tasp1 tasp1 coding downstream 754023 4244998 ~ 4337416 (+)
G1333324 NA non-coding upstream 28230 3461101 ~ 3461701 (+)
G1333310 NA non-coding upstream 59621 3428000 ~ 3430310 (+)
G1333304 NA non-coding upstream 66549 3422910 ~ 3423382 (+)
G1333282 NA non-coding upstream 91637 3388588 ~ 3398294 (+)
G1333276 NA non-coding upstream 110959 3378739 ~ 3378972 (+)
G1333403 NA non-coding downstream 89831 3580806 ~ 3581498 (+)
G1333464 NA non-coding downstream 206439 3697414 ~ 3699982 (+)
G1333447 NA non-coding downstream 243730 3734705 ~ 3735812 (+)
G1333570 NA non-coding downstream 256267 3747242 ~ 3747512 (+)
G1333574 NA non-coding downstream 259662 3750637 ~ 3751000 (+)
G1332826 NA other upstream 258524 3230199 ~ 3231407 (+)
G1332701 NA other upstream 516131 2972808 ~ 2973800 (+)
heatr5b LOC106578753 other upstream 1180364 2295839 ~ 2571759 (+)
G1333963 NA other downstream 848863 4339838 ~ 4341823 (+)
LOC110491218 LOC106578757 other downstream 1243814 4640198 ~ 4973348 (+)
G1334530 NA other downstream 2028965 5519940 ~ 5521230 (+)
G1334592 NA other downstream 2212860 5703835 ~ 5704946 (+)
G1335704 NA other downstream 3100001 6590976 ~ 6591915 (+)

Expression


Co-expression Network