Gene
RNA
| Item | Value |
|---|---|
| gene id | G1333447 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 3734705 ~ 3735812 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1524173 | True | 534 | lncRNA | 0.33 | 2 | 3734705 | 3735812 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118939498 | LOC106591840 | coding | upstream | 3774 | 3694598 ~ 3730931 (+) |
| LOC118939483 | NA | coding | upstream | 47612 | 3686543 ~ 3687093 (+) |
| LOC110492796 | slx4ip | coding | upstream | 532979 | 3065065 ~ 3201726 (+) |
| LOC110492798 | LOC106590888 | coding | upstream | 681217 | 2989203 ~ 3054026 (+) |
| memo1 | LOC106578779 | coding | upstream | 765099 | 2945412 ~ 2969606 (+) |
| btbd3b | LOC106578575 | coding | downstream | 130672 | 3866484 ~ 3902198 (+) |
| sptlc3 | sptlc3 | coding | downstream | 398605 | 4134417 ~ 4229378 (+) |
| tasp1 | tasp1 | coding | downstream | 509186 | 4244998 ~ 4337416 (+) |
| LOC110491218 | LOC106578757 | coding | downstream | 904386 | 4640198 ~ 4973348 (+) |
| LOC110491219 | LOC106578758 | coding | downstream | 1239708 | 4975520 ~ 4978736 (+) |
| G1333464 | NA | non-coding | upstream | 34723 | 3697414 ~ 3699982 (+) |
| G1333403 | NA | non-coding | upstream | 153207 | 3580806 ~ 3581498 (+) |
| G1333333 | NA | non-coding | upstream | 243730 | 3489931 ~ 3490975 (+) |
| G1333324 | NA | non-coding | upstream | 273004 | 3461101 ~ 3461701 (+) |
| G1333310 | NA | non-coding | upstream | 304395 | 3428000 ~ 3430310 (+) |
| G1333570 | NA | non-coding | downstream | 11430 | 3747242 ~ 3747512 (+) |
| G1333574 | NA | non-coding | downstream | 14825 | 3750637 ~ 3751000 (+) |
| G1333584 | NA | non-coding | downstream | 25099 | 3760911 ~ 3761147 (+) |
| G1333586 | NA | non-coding | downstream | 26320 | 3762132 ~ 3762372 (+) |
| G1333593 | NA | non-coding | downstream | 35114 | 3770926 ~ 3771136 (+) |
| G1332826 | NA | other | upstream | 503298 | 3230199 ~ 3231407 (+) |
| G1332701 | NA | other | upstream | 760905 | 2972808 ~ 2973800 (+) |
| LOC110491239 | LOC106578780 | other | upstream | 794765 | 2931169 ~ 2939940 (+) |
| heatr5b | LOC106578753 | other | upstream | 1425138 | 2295839 ~ 2571759 (+) |
| G1333963 | NA | other | downstream | 604026 | 4339838 ~ 4341823 (+) |
| G1334530 | NA | other | downstream | 1784128 | 5519940 ~ 5521230 (+) |
| G1334592 | NA | other | downstream | 1968023 | 5703835 ~ 5704946 (+) |
| G1335704 | NA | other | downstream | 2855164 | 6590976 ~ 6591915 (+) |
