G1334112


Basic Information

Item Value
gene id G1334112
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 4636599 ~ 4637339 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1525085
tgtgtCTCTCCAGCTCGGTGAATGTGTCCCTCTCAGTGATGAAGGAGCAGTGCAGTTGTGGGACCTGGGTGTGTTCAGTGCTGGTGACCATCCTCGTCTGCAGGACAGTTAGAAGAGGTGTGTTCAGTGCTGGTGACCATCCTCGTCAGCAGGACAGTTAGAAGAGGTGTGTTCAGTGCTGGTGACCATCCTCGTCAGCAGGACAGTTAGAAGAGATGTGTTCAGTGCTGGTGGGGGTGACCATCCTCGTCAGCAGGACAGTTAGAAGAG

Function

NR:

description
uncharacterized protein LOC109903065

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1525085 True 270 lncRNA 0.54 2 4636599 4637339

Neighbor

gene id symbol gene type direction distance location
tasp1 tasp1 coding upstream 299183 4244998 ~ 4337416 (+)
sptlc3 sptlc3 coding upstream 407221 4134417 ~ 4229378 (+)
btbd3b LOC106578575 coding upstream 734401 3866484 ~ 3902198 (+)
LOC118939498 LOC106591840 coding upstream 905668 3694598 ~ 3730931 (+)
LOC118939483 NA coding upstream 949506 3686543 ~ 3687093 (+)
LOC110491218 LOC106578757 coding downstream 2859 4640198 ~ 4973348 (+)
LOC110491219 LOC106578758 coding downstream 338181 4975520 ~ 4978736 (+)
trnaa-ugc-125 NA coding downstream 467703 5105042 ~ 5105117 (+)
LOC110491235 LOC106578800 coding downstream 518551 5155890 ~ 5196581 (+)
LOC110492801 LOC106589958 coding downstream 559355 5196694 ~ 5243823 (+)
G1334069 NA non-coding upstream 86268 4548731 ~ 4550331 (+)
G1334032 NA non-coding upstream 190050 4439598 ~ 4446549 (+)
G1334033 NA non-coding upstream 190893 4441591 ~ 4445706 (+)
G1334013 NA non-coding upstream 237556 4398710 ~ 4399043 (+)
G1334011 NA non-coding upstream 239222 4397055 ~ 4397377 (+)
G1334117 NA non-coding downstream 11702 4649041 ~ 4649494 (+)
G1334152 NA non-coding downstream 56084 4693423 ~ 4693755 (+)
G1334181 NA non-coding downstream 99566 4736905 ~ 4737460 (+)
G1334205 NA non-coding downstream 150304 4787643 ~ 4788159 (+)
G1334207 NA non-coding downstream 158371 4795710 ~ 4797046 (+)
G1333963 NA other upstream 295731 4339838 ~ 4341823 (+)
G1332826 NA other upstream 1405192 3230199 ~ 3231407 (+)
LOC110492796 slx4ip other upstream 1439348 3065065 ~ 3201726 (+)
G1332701 NA other upstream 1662799 2972808 ~ 2973800 (+)
LOC110491239 LOC106578780 other upstream 1696659 2931169 ~ 2939940 (+)
G1334530 NA other downstream 882601 5519940 ~ 5521230 (+)
G1334592 NA other downstream 1066496 5703835 ~ 5704946 (+)
G1335704 NA other downstream 1953637 6590976 ~ 6591915 (+)
G1335763 NA other downstream 2126973 6764312 ~ 6768586 (+)

Expression


Co-expression Network