Gene
RNA
| Item | Value |
|---|---|
| gene id | G1334117 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 4649041 ~ 4649494 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1525090 | True | 382 | lncRNA | 0.52 | 2 | 4649041 | 4649494 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| tasp1 | tasp1 | coding | upstream | 311625 | 4244998 ~ 4337416 (+) |
| sptlc3 | sptlc3 | coding | upstream | 419663 | 4134417 ~ 4229378 (+) |
| btbd3b | LOC106578575 | coding | upstream | 746843 | 3866484 ~ 3902198 (+) |
| LOC118939498 | LOC106591840 | coding | upstream | 918110 | 3694598 ~ 3730931 (+) |
| LOC118939483 | NA | coding | upstream | 961948 | 3686543 ~ 3687093 (+) |
| LOC110491219 | LOC106578758 | coding | downstream | 326026 | 4975520 ~ 4978736 (+) |
| trnaa-ugc-125 | NA | coding | downstream | 455548 | 5105042 ~ 5105117 (+) |
| LOC110491235 | LOC106578800 | coding | downstream | 506396 | 5155890 ~ 5196581 (+) |
| LOC110492801 | LOC106589958 | coding | downstream | 547200 | 5196694 ~ 5243823 (+) |
| LOC110491229 | LOC105028001 | coding | downstream | 600816 | 5245325 ~ 5344475 (+) |
| G1334112 | NA | non-coding | upstream | 11702 | 4636599 ~ 4637339 (+) |
| G1334069 | NA | non-coding | upstream | 98710 | 4548731 ~ 4550331 (+) |
| G1334032 | NA | non-coding | upstream | 202492 | 4439598 ~ 4446549 (+) |
| G1334033 | NA | non-coding | upstream | 203335 | 4441591 ~ 4445706 (+) |
| G1334013 | NA | non-coding | upstream | 249998 | 4398710 ~ 4399043 (+) |
| G1334152 | NA | non-coding | downstream | 43929 | 4693423 ~ 4693755 (+) |
| G1334181 | NA | non-coding | downstream | 87411 | 4736905 ~ 4737460 (+) |
| G1334205 | NA | non-coding | downstream | 138149 | 4787643 ~ 4788159 (+) |
| G1334207 | NA | non-coding | downstream | 146216 | 4795710 ~ 4797046 (+) |
| G1334218 | NA | non-coding | downstream | 167282 | 4816776 ~ 4817360 (+) |
| G1333963 | NA | other | upstream | 308173 | 4339838 ~ 4341823 (+) |
| G1332826 | NA | other | upstream | 1417634 | 3230199 ~ 3231407 (+) |
| LOC110492796 | slx4ip | other | upstream | 1451790 | 3065065 ~ 3201726 (+) |
| G1332701 | NA | other | upstream | 1675241 | 2972808 ~ 2973800 (+) |
| LOC110491239 | LOC106578780 | other | upstream | 1709101 | 2931169 ~ 2939940 (+) |
| LOC110491218 | LOC106578757 | other | downstream | 85295 | 4640198 ~ 4973348 (+) |
| G1334530 | NA | other | downstream | 870446 | 5519940 ~ 5521230 (+) |
| G1334592 | NA | other | downstream | 1054341 | 5703835 ~ 5704946 (+) |
| G1335704 | NA | other | downstream | 1941482 | 6590976 ~ 6591915 (+) |
| G1335763 | NA | other | downstream | 2114818 | 6764312 ~ 6768586 (+) |
