Gene
RNA
| Item | Value |
|---|---|
| gene id | G1334218 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 4816776 ~ 4817360 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1525203 | True | 287 | lncRNA | 0.41 | 2 | 4816776 | 4817360 |
4,813,600
4,814,000
4,814,400
4,814,800
4,815,200
4,815,600
4,816,000
4,816,000
4,816,400
4,816,800
4,817,200
4,817,600
4,818,000
4,818,400
NC_048580.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| tasp1 | tasp1 | coding | upstream | 479360 | 4244998 ~ 4337416 (+) |
| sptlc3 | sptlc3 | coding | upstream | 587398 | 4134417 ~ 4229378 (+) |
| btbd3b | LOC106578575 | coding | upstream | 914578 | 3866484 ~ 3902198 (+) |
| LOC118939498 | LOC106591840 | coding | upstream | 1085845 | 3694598 ~ 3730931 (+) |
| LOC118939483 | NA | coding | upstream | 1129683 | 3686543 ~ 3687093 (+) |
| LOC110491219 | LOC106578758 | coding | downstream | 158160 | 4975520 ~ 4978736 (+) |
| trnaa-ugc-125 | NA | coding | downstream | 287682 | 5105042 ~ 5105117 (+) |
| LOC110491235 | LOC106578800 | coding | downstream | 338530 | 5155890 ~ 5196581 (+) |
| LOC110492801 | LOC106589958 | coding | downstream | 379334 | 5196694 ~ 5243823 (+) |
| LOC110491229 | LOC105028001 | coding | downstream | 432950 | 5245325 ~ 5344475 (+) |
| G1334207 | NA | non-coding | upstream | 19730 | 4795710 ~ 4797046 (+) |
| G1334205 | NA | non-coding | upstream | 28617 | 4787643 ~ 4788159 (+) |
| G1334181 | NA | non-coding | upstream | 79316 | 4736905 ~ 4737460 (+) |
| G1334152 | NA | non-coding | upstream | 123021 | 4693423 ~ 4693755 (+) |
| G1334117 | NA | non-coding | upstream | 167282 | 4649041 ~ 4649494 (+) |
| G1334222 | NA | non-coding | downstream | 6240 | 4823600 ~ 4825514 (+) |
| G1334230 | NA | non-coding | downstream | 26446 | 4843806 ~ 4844138 (+) |
| G1334231 | NA | non-coding | downstream | 26785 | 4844145 ~ 4844672 (+) |
| G1334235 | NA | non-coding | downstream | 39000 | 4856360 ~ 4858974 (+) |
| G1334289 | NA | non-coding | downstream | 148836 | 4966196 ~ 4966834 (+) |
| G1333963 | NA | other | upstream | 475908 | 4339838 ~ 4341823 (+) |
| G1332826 | NA | other | upstream | 1585369 | 3230199 ~ 3231407 (+) |
| LOC110492796 | slx4ip | other | upstream | 1619525 | 3065065 ~ 3201726 (+) |
| G1332701 | NA | other | upstream | 1842976 | 2972808 ~ 2973800 (+) |
| LOC110491239 | LOC106578780 | other | upstream | 1876836 | 2931169 ~ 2939940 (+) |
| G1334530 | NA | other | downstream | 702580 | 5519940 ~ 5521230 (+) |
| G1334592 | NA | other | downstream | 886475 | 5703835 ~ 5704946 (+) |
| G1335704 | NA | other | downstream | 1773616 | 6590976 ~ 6591915 (+) |
| G1335763 | NA | other | downstream | 1946952 | 6764312 ~ 6768586 (+) |
| kif20ba | LOC106589940 | other | downstream | 2217514 | 7024970 ~ 7073332 (+) |
