Gene
RNA
| Item | Value |
|---|---|
| gene id | G1334289 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 4966196 ~ 4966834 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1525283 | True | 603 | lncRNA | 0.46 | 2 | 4966196 | 4966834 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| tasp1 | tasp1 | coding | upstream | 628780 | 4244998 ~ 4337416 (+) |
| sptlc3 | sptlc3 | coding | upstream | 736818 | 4134417 ~ 4229378 (+) |
| btbd3b | LOC106578575 | coding | upstream | 1063998 | 3866484 ~ 3902198 (+) |
| LOC118939498 | LOC106591840 | coding | upstream | 1235265 | 3694598 ~ 3730931 (+) |
| LOC118939483 | NA | coding | upstream | 1279103 | 3686543 ~ 3687093 (+) |
| LOC110491219 | LOC106578758 | coding | downstream | 8686 | 4975520 ~ 4978736 (+) |
| trnaa-ugc-125 | NA | coding | downstream | 138208 | 5105042 ~ 5105117 (+) |
| LOC110491235 | LOC106578800 | coding | downstream | 189056 | 5155890 ~ 5196581 (+) |
| LOC110492801 | LOC106589958 | coding | downstream | 229860 | 5196694 ~ 5243823 (+) |
| LOC110491229 | LOC105028001 | coding | downstream | 283476 | 5245325 ~ 5344475 (+) |
| G1334235 | NA | non-coding | upstream | 107222 | 4856360 ~ 4858974 (+) |
| G1334231 | NA | non-coding | upstream | 121524 | 4844145 ~ 4844672 (+) |
| G1334230 | NA | non-coding | upstream | 122058 | 4843806 ~ 4844138 (+) |
| G1334222 | NA | non-coding | upstream | 140682 | 4823600 ~ 4825514 (+) |
| G1334218 | NA | non-coding | upstream | 148836 | 4816776 ~ 4817360 (+) |
| G1334293 | NA | non-coding | downstream | 17845 | 4984679 ~ 4984954 (+) |
| G1334304 | NA | non-coding | downstream | 26272 | 4993106 ~ 4993569 (+) |
| G1334305 | NA | non-coding | downstream | 26746 | 4993580 ~ 4994085 (+) |
| G1334313 | NA | non-coding | downstream | 53732 | 5020566 ~ 5021627 (+) |
| G1334329 | NA | non-coding | downstream | 86362 | 5053196 ~ 5053495 (+) |
| LOC110491218 | LOC106578757 | other | upstream | 28517 | 4640198 ~ 4973348 (+) |
| G1333963 | NA | other | upstream | 625328 | 4339838 ~ 4341823 (+) |
| G1332826 | NA | other | upstream | 1734789 | 3230199 ~ 3231407 (+) |
| LOC110492796 | slx4ip | other | upstream | 1768945 | 3065065 ~ 3201726 (+) |
| G1332701 | NA | other | upstream | 1992396 | 2972808 ~ 2973800 (+) |
| G1334530 | NA | other | downstream | 553106 | 5519940 ~ 5521230 (+) |
| G1334592 | NA | other | downstream | 737001 | 5703835 ~ 5704946 (+) |
| G1335704 | NA | other | downstream | 1624142 | 6590976 ~ 6591915 (+) |
| G1335763 | NA | other | downstream | 1797478 | 6764312 ~ 6768586 (+) |
| kif20ba | LOC106589940 | other | downstream | 2068040 | 7024970 ~ 7073332 (+) |
