G1334305


Basic Information

Item Value
gene id G1334305
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 4993580 ~ 4994085 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1525302
gagaaacacaggtaACATTACGCTATTtaaaacacagagaaacacaggtaACATTAAGCTATTtaaaacacagagaaacacaggtaACATTAAGCTATTtaaaaacacagagaaacacaggtaACATTAAGCTATTtaaaacacagagaaacacagttaACATTAAGCTATTtaaaacacagagaaacacaggtaACATTAAGCTATTtaaaaacacagagaaacacaggtaACATTAAGCTATTTAAAAACAAAGAGAAACACAGGTAACATTAAGCTATTtaaaaacacagagaaacacaggtaACATTAAGCTATTtaaaacacagagaaacacaggtaACATTAAGCTATTtaaaacacagagaaacacaggtaACATTAAGCTATTtaaaaacacagagaaacacaggtaACATTAAGCTATTtaaaa

Function

NR:

description
histidine-rich glycoprotein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1525302 True 433 lncRNA 0.30 3 4993580 4994085

Neighbor

gene id symbol gene type direction distance location
LOC110491219 LOC106578758 coding upstream 14844 4975520 ~ 4978736 (+)
LOC110491218 LOC106578757 coding upstream 20232 4640198 ~ 4973348 (+)
tasp1 tasp1 coding upstream 656164 4244998 ~ 4337416 (+)
sptlc3 sptlc3 coding upstream 764202 4134417 ~ 4229378 (+)
btbd3b LOC106578575 coding upstream 1091382 3866484 ~ 3902198 (+)
trnaa-ugc-125 NA coding downstream 110957 5105042 ~ 5105117 (+)
LOC110491235 LOC106578800 coding downstream 161805 5155890 ~ 5196581 (+)
LOC110492801 LOC106589958 coding downstream 202609 5196694 ~ 5243823 (+)
LOC110491229 LOC105028001 coding downstream 256225 5245325 ~ 5344475 (+)
LOC110492803 LOC106589963 coding downstream 357466 5351418 ~ 5390024 (+)
G1334304 NA non-coding upstream 11 4993106 ~ 4993569 (+)
G1334293 NA non-coding upstream 8626 4984679 ~ 4984954 (+)
G1334289 NA non-coding upstream 26746 4966196 ~ 4966834 (+)
G1334235 NA non-coding upstream 134606 4856360 ~ 4858974 (+)
G1334231 NA non-coding upstream 148908 4844145 ~ 4844672 (+)
G1334313 NA non-coding downstream 26481 5020566 ~ 5021627 (+)
G1334329 NA non-coding downstream 59111 5053196 ~ 5053495 (+)
G1334333 NA non-coding downstream 67436 5061521 ~ 5062078 (+)
G1334349 NA non-coding downstream 109510 5103595 ~ 5104450 (+)
G1334351 NA non-coding downstream 111702 5105787 ~ 5106585 (+)
G1333963 NA other upstream 652712 4339838 ~ 4341823 (+)
G1332826 NA other upstream 1762173 3230199 ~ 3231407 (+)
LOC110492796 slx4ip other upstream 1796329 3065065 ~ 3201726 (+)
G1332701 NA other upstream 2019780 2972808 ~ 2973800 (+)
G1334530 NA other downstream 525855 5519940 ~ 5521230 (+)
G1334592 NA other downstream 709750 5703835 ~ 5704946 (+)
G1335704 NA other downstream 1596891 6590976 ~ 6591915 (+)
G1335763 NA other downstream 1770227 6764312 ~ 6768586 (+)
kif20ba LOC106589940 other downstream 2040789 7024970 ~ 7073332 (+)

Expression


Co-expression Network