G1334313


Basic Information

Item Value
gene id G1334313
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 5020566 ~ 5021627 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1525316
GAAGGGACTAGAGAACGAGGTAGTAGTTCCCACTGAGATGGGACTAGAGAACGAGGTAGTAGTTCCCACTGAGATGGGACTAGAGAACGAGGTAGTAGTTCCCACTAAGATGGGACTAGAGAACAAGGTAGTAGTTCCCACTGGGATGGGACTAGAGAACGAGGTAGTAGTTCCCACTGAGATGGGACTAGAGAATGAGGTAGTAGTTCCCACTGAGATGGGACTAGAGAAGGA

Function

NR:

description
mucin-2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1525316 True 234 lncRNA 0.49 2 5020566 5021627

Neighbor

gene id symbol gene type direction distance location
LOC110491219 LOC106578758 coding upstream 41830 4975520 ~ 4978736 (+)
LOC110491218 LOC106578757 coding upstream 47218 4640198 ~ 4973348 (+)
tasp1 tasp1 coding upstream 683150 4244998 ~ 4337416 (+)
sptlc3 sptlc3 coding upstream 791188 4134417 ~ 4229378 (+)
btbd3b LOC106578575 coding upstream 1118368 3866484 ~ 3902198 (+)
trnaa-ugc-125 NA coding downstream 83415 5105042 ~ 5105117 (+)
LOC110491235 LOC106578800 coding downstream 134263 5155890 ~ 5196581 (+)
LOC110492801 LOC106589958 coding downstream 175067 5196694 ~ 5243823 (+)
LOC110491229 LOC105028001 coding downstream 228683 5245325 ~ 5344475 (+)
LOC110492803 LOC106589963 coding downstream 329924 5351418 ~ 5390024 (+)
G1334305 NA non-coding upstream 26481 4993580 ~ 4994085 (+)
G1334304 NA non-coding upstream 26997 4993106 ~ 4993569 (+)
G1334293 NA non-coding upstream 35612 4984679 ~ 4984954 (+)
G1334289 NA non-coding upstream 53732 4966196 ~ 4966834 (+)
G1334235 NA non-coding upstream 161592 4856360 ~ 4858974 (+)
G1334329 NA non-coding downstream 31569 5053196 ~ 5053495 (+)
G1334333 NA non-coding downstream 39894 5061521 ~ 5062078 (+)
G1334349 NA non-coding downstream 81968 5103595 ~ 5104450 (+)
G1334351 NA non-coding downstream 84160 5105787 ~ 5106585 (+)
G1334365 NA non-coding downstream 100637 5122264 ~ 5122899 (+)
G1333963 NA other upstream 679698 4339838 ~ 4341823 (+)
G1332826 NA other upstream 1789159 3230199 ~ 3231407 (+)
LOC110492796 slx4ip other upstream 1823315 3065065 ~ 3201726 (+)
G1332701 NA other upstream 2046766 2972808 ~ 2973800 (+)
G1334530 NA other downstream 498313 5519940 ~ 5521230 (+)
G1334592 NA other downstream 682208 5703835 ~ 5704946 (+)
G1335704 NA other downstream 1569349 6590976 ~ 6591915 (+)
G1335763 NA other downstream 1742685 6764312 ~ 6768586 (+)
kif20ba LOC106589940 other downstream 2013247 7024970 ~ 7073332 (+)

Expression


Co-expression Network