Gene
RNA
| Item | Value |
|---|---|
| gene id | G1335113 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 5295943 ~ 5296393 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: CSC1-like protein 2 isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1526381 | True | 252 | lncRNA | 0.50 | 2 | 5295943 | 5296393 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| mrpl14 | mrpl14 | coding | downstream | 45801 | 5245465 ~ 5250142 (-) |
| LOC110491224 | LOC106578801 | coding | downstream | 174793 | 5080963 ~ 5121150 (-) |
| LOC110491233 | LOC106589988 | coding | downstream | 224305 | 5062289 ~ 5071638 (-) |
| LOC110492792 | LOC106578787 | coding | downstream | 249190 | 5045238 ~ 5241428 (-) |
| LOC118939500 | LOC106578803 | coding | downstream | 257139 | 4992545 ~ 5038804 (-) |
| LOC110491249 | NA | coding | upstream | 50183 | 5346576 ~ 5347630 (-) |
| LOC110491250 | LOC106578784 | coding | upstream | 95485 | 5391878 ~ 5396773 (-) |
| LOC110491274 | LOC106578810 | coding | upstream | 1016006 | 6312399 ~ 6336247 (-) |
| mrps6 | mrps6 | coding | upstream | 1063056 | 6359449 ~ 6360346 (-) |
| micu1 | micu1 | coding | upstream | 1100859 | 6397252 ~ 6501980 (-) |
| G1335060 | NA | non-coding | downstream | 21751 | 5273597 ~ 5274192 (-) |
| G1335087 | NA | non-coding | downstream | 52087 | 5241732 ~ 5243856 (-) |
| G1335083 | NA | non-coding | downstream | 67506 | 5227749 ~ 5228437 (-) |
| G1335070 | NA | non-coding | downstream | 87531 | 5196641 ~ 5208412 (-) |
| G1335131 | NA | non-coding | upstream | 44727 | 5341120 ~ 5342221 (-) |
| G1335134 | NA | non-coding | upstream | 56512 | 5352905 ~ 5353191 (-) |
| G1335138 | NA | non-coding | upstream | 92994 | 5389387 ~ 5390208 (-) |
| G1335149 | LOC105027999 | non-coding | upstream | 106298 | 5402691 ~ 5403631 (-) |
| G1335148 | NA | non-coding | upstream | 115549 | 5411942 ~ 5412634 (-) |
| G1335108 | NA | other | downstream | 7788 | 5287033 ~ 5288155 (-) |
| G1334939 | NA | other | downstream | 409545 | 4885288 ~ 4886398 (-) |
| G1334697 | NA | other | downstream | 957284 | 4338136 ~ 4338659 (-) |
| G1335145 | NA | other | upstream | 91565 | 5387958 ~ 5389383 (-) |
| G1335222 | NA | other | upstream | 355016 | 5624448 ~ 5652867 (-) |
| G1335308 | NA | other | upstream | 476340 | 5772733 ~ 5773144 (-) |
| G1336033 | NA | other | upstream | 1006614 | 6303007 ~ 6303731 (-) |
| LOC110491271 | cssa19h6orf118 | other | upstream | 1441911 | 6738304 ~ 6757114 (-) |
