G1334561


Basic Information

Item Value
gene id G1334561
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 5632617 ~ 5633385 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1525640
GTGTGGGTACTTTAGGTGAGAGTGGGTACTGTAGTTGAGAGTGTGGTTACTGTAGGTGAGAGTGGGTACTGTAGGTGATAGTGTGGGTACTGTAGGTGAGAGTGTGGGTACTGTAGGTGAGAGTGTGGGTACTGTAGGTGAGAATGTGGGTACTGTAGGTGAGAGTGGGTACTGTAGTTGAGAGTGGGTACTGTAGGTGAGAGTGTGGGTACTGTAGGTGAGAATGTGGGTACTATAGGTGAGAATGTGGGTACTG
>TU1525641
GTGTGGGTACTTTAGGTGAGAGTGGGTACTGTAGTTGAGAGTGTGGTTACTGTAGGTGAGAGTGGGTACTGTAGGTGATAGTGTGGGTACTGTAGGTGAGAGTGTGGGTACTGTAGGTGAGAGTGTGGGTACTGTAGGTGAGAATGTGGGTACTGTAGCTGAGAATGTGGGTACTGTAGGTGAGAATGTGGGTACTGTAGGTGAGAATGTGGGTACTGTAGGTGAGAATGTGGGT

Function

NR:

description
PREDICTED: DNA-binding protein RFX7-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1525640 False 256 lncRNA 0.49 3 5632617 5632973
TU1525641 True 235 lncRNA 0.49 3 5632617 5633385

Neighbor

gene id symbol gene type direction distance location
LOC110491251 LOC106578785 coding upstream 219983 5398539 ~ 5412634 (+)
LOC110492803 LOC106589963 coding upstream 242593 5351418 ~ 5390024 (+)
LOC110491229 LOC105028001 coding upstream 290591 5245325 ~ 5344475 (+)
LOC110492801 LOC106589958 coding upstream 388794 5196694 ~ 5243823 (+)
LOC110491235 LOC106578800 coding upstream 436036 5155890 ~ 5196581 (+)
ly6pge LOC106578825 coding downstream 25344 5658729 ~ 5672106 (+)
LOC118939486 unc5b coding downstream 490242 6123627 ~ 6216822 (+)
slc29a3 slc29a3 coding downstream 619298 6252683 ~ 6289144 (+)
LOC110491277 LOC106578812 coding downstream 699955 6333340 ~ 6357849 (+)
LOC110491273 LOC106578809 coding downstream 727203 6334443 ~ 6382556 (+)
G1334482 NA non-coding upstream 34875 5596602 ~ 5597742 (+)
G1334551 NA non-coding upstream 38784 5591995 ~ 5593833 (+)
G1334544 NA non-coding upstream 58618 5573110 ~ 5573999 (+)
G1334543 NA non-coding upstream 59648 5572162 ~ 5572969 (+)
G1334532 NA non-coding upstream 103010 5525885 ~ 5529607 (+)
G1334568 NA non-coding downstream 14057 5647442 ~ 5669731 (+)
G1334476 NA non-coding downstream 15043 5648428 ~ 5699055 (+)
tacc2 LOC106578818 non-coding downstream 15641 5536927 ~ 5652871 (+)
G1334580 NA non-coding downstream 43447 5676832 ~ 5677763 (+)
G1334581 NA non-coding downstream 44689 5678074 ~ 5678361 (+)
G1334530 NA other upstream 111387 5519940 ~ 5521230 (+)
LOC110491218 LOC106578757 other upstream 694938 4640198 ~ 4973348 (+)
G1333963 NA other upstream 1291749 4339838 ~ 4341823 (+)
G1332826 NA other upstream 2401210 3230199 ~ 3231407 (+)
LOC110492796 slx4ip other upstream 2435366 3065065 ~ 3201726 (+)
G1334592 NA other downstream 70450 5703835 ~ 5704946 (+)
G1335704 NA other downstream 957591 6590976 ~ 6591915 (+)
G1335763 NA other downstream 1130927 6764312 ~ 6768586 (+)
kif20ba LOC106589940 other downstream 1401489 7024970 ~ 7073332 (+)
G1335921 NA other downstream 1425516 7058901 ~ 7059543 (+)

Expression


Co-expression Network