G1335609


Basic Information

Item Value
gene id G1335609
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 6379748 ~ 6380636 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1527002
CATTACAGCTCTCTGTGTACTAAGCCCTTCATTTAAACACCCATTACAGCTCTCTGTGTACTAAGCCCTTCATTTAAACCCCATTACAGCTCTCTGTGTACTAAGCCCTTCATTTAAACACACATTACAGCTCTCTGTGTACTAAGCCCTTCATTTAAACACCATTACAGCTCTCTGTGTACTAAGCCCTTCATTTAAACACCATTACAGCTCTCTGTGTACTAAGCCCTTCATTTAAACACACATTACAGCTCTGTGTACTAAGCCCTTCATTTAAACACCATTACAGCTCTGTGTACTAAGCCCTTCATTTAAACACCATTACAGCTCTGTGTACTAAGCCCTTCATTTAAACACCATTACAGCTCTGTGTACTAAGCCCTTCATTTAAACACCATTACAGCTCTCTGTGTACTAAGCCCTTCATTTAAACACCATTACAGCTCTGTGTACTAAGCCCTTCATTTAAACACCATTACAGCTCTCTGTGTAGAAACATTATTGGTAATATTTATTCACTCAAGTGAAGGGCAtttaaacatttaatttaatttgtaaatctaacaagtaatttcTGGGTAATGATTtaaataccttactgtgattggtTAAAATTCTAAATGGTCAAAAAAGAGAAACGAACAGCTTCTTGGCAAAGATCGAGTTTCCAATTTAGCTgtgagggg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1527002 True 686 lncRNA 0.37 2 6379748 6380636

Neighbor

gene id symbol gene type direction distance location
LOC110491277 LOC106578812 coding upstream 21899 6333340 ~ 6357849 (+)
slc29a3 slc29a3 coding upstream 90604 6252683 ~ 6289144 (+)
LOC118939486 unc5b coding upstream 162926 6123627 ~ 6216822 (+)
ly6pge LOC106578825 coding upstream 707642 5658729 ~ 5672106 (+)
tacc2 LOC106578818 coding upstream 726877 5536927 ~ 5652871 (+)
mcu mcu coding downstream 146159 6526795 ~ 6651585 (+)
oit3 oit3 coding downstream 299079 6679715 ~ 6704779 (+)
kif20ba LOC106589940 coding downstream 644334 7024970 ~ 7073332 (+)
zgc:65997 LOC106578833 coding downstream 745111 7125747 ~ 7128548 (+)
pank1a LOC106578834 coding downstream 750411 7131047 ~ 7156797 (+)
G1335604 NA non-coding upstream 10032 6369252 ~ 6369716 (+)
G1335571 NA non-coding upstream 53801 6325197 ~ 6325947 (+)
G1335567 NA non-coding upstream 64418 6264154 ~ 6315330 (+)
G1335553 NA non-coding upstream 129828 6247824 ~ 6249920 (+)
G1335548 NA non-coding upstream 145056 6234071 ~ 6234692 (+)
G1335613 NA non-coding downstream 5893 6386529 ~ 6473988 (+)
G1335618 NA non-coding downstream 10214 6390850 ~ 6391132 (+)
G1335645 NA non-coding downstream 82830 6463466 ~ 6464016 (+)
G1335653 NA non-coding downstream 101144 6481780 ~ 6573646 (+)
G1335663 NA non-coding downstream 125617 6506253 ~ 6509089 (+)
G1334592 NA other upstream 674802 5703835 ~ 5704946 (+)
G1334530 NA other upstream 858518 5519940 ~ 5521230 (+)
LOC110491218 LOC106578757 other upstream 1442069 4640198 ~ 4973348 (+)
G1333963 NA other upstream 2038880 4339838 ~ 4341823 (+)
G1332826 NA other upstream 3148341 3230199 ~ 3231407 (+)
G1335704 NA other downstream 210340 6590976 ~ 6591915 (+)
G1335763 NA other downstream 383676 6764312 ~ 6768586 (+)
G1335921 NA other downstream 678265 7058901 ~ 7059543 (+)
G1336428 NA other downstream 726835 7107471 ~ 7108714 (+)

Expression


Co-expression Network