G1335663


Basic Information

Item Value
gene id G1335663
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 6506253 ~ 6509089 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1527077
aatacaacaggtgtagtagaccttactgtgaaatactgactacaacaggtgtagtagaccttactgtgaaatactgactacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagacctcccagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagacctcccagtgaaatgctgaatacaacaggtgtaggtagaccttacagtgaaatgctgaatacaacaggtgtagtagacctcccagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgttgaatacaacaggtgtagtagacctcacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagacctcccagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccacacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttactgtgaaatactgactacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatactgactacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttactgtgaaatgctgaatacaacaggtgtagtagaccttacagtgtaatgctgaatataacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtaggtagaccttacagtgaaatgctgaatacaacaggtgtagtagacctcacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgccgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatataacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtaggtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgccgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtaggtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgccgaatacaacaggtgtagcagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagcagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtaaaatgctgaatacaacaggtgtagtagaccttactgtgaaatgctgaatacaacaggtgtagtagaccttactgtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagacctcccagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagacctcccagtgaaatgttgaatacaacaggtgtagtagaccttactgtgaaatgcttacttacatgcccttaaccaacaatgcagttttaagaaaatagagttataTTTAAGTCTGAATAGGGAGATAGTTAACCCAACCATGGAGACAACGACCGGTCGCTGGTCTCCTTTTATCATGGCAAGTCTGAATAGAGAGATAGTTAACCCAACCATGGAGACAGGAAGGAC
>TU1527079
aatacaacaggtgtagtagaccttactgtgaaatactgactacaacaggtgtagtagaccttactgtgaaatactgactacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagacctcccagtgaaatgctgaatacaacaggtgtagtagacctcccagtgaaatgctgaatacaacaggtgtagtagacctcacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagacctcccagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagacctcccagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccacacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttactgtgaaatactgactacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatactgactacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttactgtgaaatgctgaatactacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtaggtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttactgtgaaatactgactacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttactgtgaaatgctgaatacaacaggtgtagtagaccttactgtgaaatgctgaatacaacaggtgtagtagaccttactgtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagacctcccagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagacctcccagtgaaatgttgaatacaacaggtgtagtagaccttactgtgaaatgcttacttacatgcccttaaccaacaatgcagttttaagaaaatagagttataTTTAAGTCTGAATAGGGAGATAGTTAACCCAACCATGGAGACAACGACCGGTCGCTGGTCTCCTTTTATCATGGCAAGTCTGAATAGAGAGATAGTTAACCCAACCATGGAGACAGGAAGGAC

Function

NR:

description
PREDICTED: uncharacterized protein LOC106584693 isoform X7

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1527077 False 2456 lncRNA 0.40 3 6506253 6509089
TU1527079 True 1655 lncRNA 0.40 6 6506253 6509089

Neighbor

gene id symbol gene type direction distance location
LOC110491273 LOC106578809 coding upstream 123697 6334443 ~ 6382556 (+)
LOC110491277 LOC106578812 coding upstream 148404 6333340 ~ 6357849 (+)
slc29a3 slc29a3 coding upstream 217109 6252683 ~ 6289144 (+)
LOC118939486 unc5b coding upstream 289431 6123627 ~ 6216822 (+)
ly6pge LOC106578825 coding upstream 834147 5658729 ~ 5672106 (+)
mcu mcu coding downstream 17706 6526795 ~ 6651585 (+)
oit3 oit3 coding downstream 170626 6679715 ~ 6704779 (+)
kif20ba LOC106589940 coding downstream 515881 7024970 ~ 7073332 (+)
zgc:65997 LOC106578833 coding downstream 616658 7125747 ~ 7128548 (+)
pank1a LOC106578834 coding downstream 621958 7131047 ~ 7156797 (+)
G1335613 NA non-coding upstream 32265 6386529 ~ 6473988 (+)
G1335645 NA non-coding upstream 42237 6463466 ~ 6464016 (+)
G1335618 NA non-coding upstream 115121 6390850 ~ 6391132 (+)
G1335609 NA non-coding upstream 125617 6379748 ~ 6380636 (+)
G1335676 NA non-coding downstream 20149 6529238 ~ 6529840 (+)
G1335679 NA non-coding downstream 29222 6538311 ~ 6538918 (+)
G1335680 NA non-coding downstream 30360 6539449 ~ 6540326 (+)
G1335674 NA non-coding downstream 34266 6543355 ~ 6544169 (+)
G1335691 NA non-coding downstream 49758 6558847 ~ 6560964 (+)
G1334592 NA other upstream 801307 5703835 ~ 5704946 (+)
G1334530 NA other upstream 985023 5519940 ~ 5521230 (+)
LOC110491218 LOC106578757 other upstream 1568574 4640198 ~ 4973348 (+)
G1333963 NA other upstream 2165385 4339838 ~ 4341823 (+)
G1332826 NA other upstream 3274846 3230199 ~ 3231407 (+)
G1335704 NA other downstream 81887 6590976 ~ 6591915 (+)
G1335763 NA other downstream 255223 6764312 ~ 6768586 (+)
G1335921 NA other downstream 549812 7058901 ~ 7059543 (+)
G1336428 NA other downstream 598382 7107471 ~ 7108714 (+)

Expression


Co-expression Network